RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 ZRANB3Q5FWF4 1079 aa20.79■□□□□ 0.92
HMGB3-205ENST00000455596 ANKS6Q68DC2 871 aa20.79■□□□□ 0.92
HMGB3-205ENST00000455596 LINC00615Q96LM1 132 aaPredicted RBP20.79■□□□□ 0.92
HMGB3-205ENST00000455596 TGM7Q96PF1 710 aa20.79■□□□□ 0.92
HMGB3-205ENST00000455596 FBXO8Q9NRD0 319 aa20.79■□□□□ 0.92
HMGB3-205ENST00000455596 PIH1D1Q9NWS0 290 aaKnown RBP20.79■□□□□ 0.92
HMGB3-205ENST00000455596 ACSL5Q9ULC5 683 aa20.79■□□□□ 0.92
HMGB3-205ENST00000455596 IGSF10Q6WRI0 2623 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 TOX3O15405 576 aaPredicted RBP20.78■□□□□ 0.92
HMGB3-205ENST00000455596 CAPN5O15484 640 aaPredicted RBP20.78■□□□□ 0.92
HMGB3-205ENST00000455596 GAS8O95995 478 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 ATP1B2P14415 290 aaPredicted RBP20.78■□□□□ 0.92
HMGB3-205ENST00000455596 CAPZBP47756 277 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 LMAN1P49257 510 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 PRLHRP49683 370 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 ATP1A2P50993 1020 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 SRSF6Q13247 344 aaKnown RBP20.78■□□□□ 0.92
HMGB3-205ENST00000455596 SNX1Q13596 522 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 TAF1BQ53T94 588 aaPredicted RBP20.78■□□□□ 0.92
HMGB3-205ENST00000455596 CEACAM20Q6UY09 585 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 DNAAF3Q8N9W5 541 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 GPR150Q8NGU9 434 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 NAT14Q8WUY8 206 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 RSC1A1Q92681 617 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 CDKN2AIPNLQ96HQ2 116 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 WWP1Q9H0M0 922 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 ETNK1Q9HBU6 452 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 ZDHHC3Q9NYG2 299 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 FAM8A1Q9UBU6 413 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 AHCTF1Q8WYP5 2266 aa20.78■□□□□ 0.92
HMGB3-205ENST00000455596 TRBV5-4A0A0C4DH59 114 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 E7EVH7 732 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 SGTAO43765 313 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 MTHFD1P11586 935 aaKnown RBP20.77■□□□□ 0.92
HMGB3-205ENST00000455596 ACRV1P26436 265 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 CCZ1BP86790 482 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 CCZ1P86791 482 aaPredicted RBP20.77■□□□□ 0.92
HMGB3-205ENST00000455596 CDH17Q12864 832 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 VASH2Q86V25 355 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 TRIM58Q8NG06 486 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 OR52K1Q8NGK4 314 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 JPH3Q8WXH2 748 aaPredicted RBP20.77■□□□□ 0.92
HMGB3-205ENST00000455596 C12orf66Q96MD2 445 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 CTRCQ99895 268 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 ZPBPQ9BS86 351 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 RAB33BQ9H082 229 aa20.77■□□□□ 0.92
HMGB3-205ENST00000455596 IMP3Q9NV31 184 aaKnown RBP20.77■□□□□ 0.92
HMGB3-205ENST00000455596 RASSF9O75901 435 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 SLC35G4P0C7Q5 338 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 LEPRP48357 1165 aaKnown RBP20.76■□□□□ 0.91
HMGB3-205ENST00000455596 CDKN1CP49918 316 aaPredicted RBP20.76■□□□□ 0.91
HMGB3-205ENST00000455596 CACNG1Q06432 222 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 PLCL1Q15111 1095 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 KIAA1614Q5VZ46 1190 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 KLHL35Q6PF15 583 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 PPP1R21Q6ZMI0 780 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 TAS2R42Q7RTR8 314 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 SERPINA9Q86WD7 417 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 CFAP206Q8IYR0 622 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 CCDC89Q8N998 374 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 ZSCAN1Q8NBB4 408 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 HM13Q8TCT9 377 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 TTC9Q92623 222 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 NKD1Q969G9 470 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 WBP1Q96G27 269 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 ZDHHC12Q96GR4 267 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 INSM2Q96T92 566 aaPredicted RBP20.76■□□□□ 0.91
HMGB3-205ENST00000455596 ZNF768Q9H5H4 540 aaKnown RBP20.76■□□□□ 0.91
HMGB3-205ENST00000455596 PAK5Q9P286 719 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 EPHA6Q9UF33 1036 aa20.76■□□□□ 0.91
HMGB3-205ENST00000455596 CFAP20Q9Y6A4 193 aaKnown RBP20.76■□□□□ 0.91
HMGB3-205ENST00000455596 IGLV3-16A0A075B6K0 115 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 C17orf113A0A1B0GUU1 675 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 MROH6A6NGR9 719 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 POLR1CO15160 346 aaPredicted RBP20.75■□□□□ 0.91
HMGB3-205ENST00000455596 SUN1O94901 812 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 ETS1P14921 441 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 SEPHS1P49903 392 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 LAMB3Q13751 1172 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 CCNG2Q16589 344 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 SKIDA1Q1XH10 827 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 IRGCQ6NXR0 463 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 PCSK4Q6UW60 755 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 PRSS42Q7Z5A4 293 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 IL22RA1Q8N6P7 574 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 MAIP1Q8WWC4 291 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 CCM2Q9BSQ5 444 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 VPS37BQ9H9H4 285 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 APMAPQ9HDC9 416 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 RAB6BQ9NRW1 208 aa20.75■□□□□ 0.91
HMGB3-205ENST00000455596 SIDT1Q9NXL6 827 aaKnown RBP20.75■□□□□ 0.91
HMGB3-205ENST00000455596 CCDC78A2IDD5 438 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 HEATR9A2RTY3 570 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 POLBP06746 335 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 PRSS56P0CW18 603 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 PSMA3P25788 255 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 SEMA5AQ13591 1074 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 GSE1Q14687 1217 aa20.74■□□□□ 0.91
HMGB3-205ENST00000455596 SIX1Q15475 284 aaPredicted RBP20.74■□□□□ 0.91
HMGB3-205ENST00000455596 CCDC38Q502W7 563 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms