RNA–Protein interactions for RNA: ENST00000451053.2

VPS33A-202, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS33A, Length 1,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-202ENST00000451053 CXorf49A8MYA2 514 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 LMO7DNF2Z398 122 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 POC1B-GALNT4F8VUJ3 575 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 TRIM38O00635 465 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 PFDN6O15212 129 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 SASH3O75995 380 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 HAUS5O94927 633 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 ANXA6P08133 673 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 OR56A5P0C7T3 313 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 ITGB6P18564 788 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 GABRB3P28472 473 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 ATP5DP30049 168 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 FMO4P31512 558 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 ABCG1P45844 678 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 LEPRP48357 1165 aaKnown RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 SERPINB9P50453 376 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 LIMK1P53667 647 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 SLC14A1Q13336 389 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 ZNF658BQ4V348 819 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 HSP90B2PQ58FF3 399 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 LGSNQ5TDP6 509 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 CNSTQ6PJW8 725 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 XKR5Q6UX68 686 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 DBX2Q6ZNG2 339 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 FAM83HQ6ZRV2 1179 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 KIAA0408Q6ZU52 694 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 GKN2Q86XP6 184 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 SFTPA2Q8IWL1 248 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 EID2Q8N6I1 236 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 PPM1NQ8N819 430 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 OR2W6PQ8NHA6 318 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 SLC44A1Q8WWI5 657 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 LINC00615Q96LM1 132 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 PAFAH2Q99487 392 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 OSGEPL1Q9H4B0 414 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 SPATS2LQ9NUQ6 558 aaKnown RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 TAAR2Q9P1P5 351 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 PSMC3IPQ9P2W1 217 aaPredicted RBP12.81□□□□□ -0.36
VPS33A-202ENST00000451053 GULP1Q9UBP9 304 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 FAM8A1Q9UBU6 413 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 ZNF180Q9UJW8 692 aa12.81□□□□□ -0.36
VPS33A-202ENST00000451053 NEMP2A6NFY4 417 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 MGAT4DA6NG13 374 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 FLRT2O43155 660 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 AHSGP02765 367 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 CNTFP26441 200 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 ADARP55265 1226 aaKnown RBP12.8□□□□□ -0.36
VPS33A-202ENST00000451053 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 NFE2L1Q14494 772 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 SUZ12Q15022 739 aaKnown RBP12.8□□□□□ -0.36
VPS33A-202ENST00000451053 EFTUD2Q15029 972 aaKnown RBP eCLIP12.8□□□□□ -0.36
VPS33A-202ENST00000451053 PTRHD1Q6GMV3 140 aaKnown RBP12.8□□□□□ -0.36
VPS33A-202ENST00000451053 ZNF549Q6P9A3 640 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 NAPRTQ6XQN6 538 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 AMZ2Q86W34 360 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 NAXDQ8IW45 347 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 KRT222Q8N1A0 295 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 LILRA3Q8N6C8 439 aaPredicted RBP12.8□□□□□ -0.36
VPS33A-202ENST00000451053 OR2L2Q8NH16 312 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 OR4C6Q8NH72 309 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 NETO1Q8TDF5 533 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 CPNE1Q99829 537 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 CCM2Q9BSQ5 444 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 MED4Q9NPJ6 270 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 NLGN3Q9NZ94 848 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 GNPTGQ9UJJ9 305 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 DOLKQ9UPQ8 538 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
VPS33A-202ENST00000451053 DNMT3AQ9Y6K1 912 aaPredicted RBP12.8□□□□□ -0.36
VPS33A-202ENST00000451053 ZFHX2Q9C0A1 2572 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 BPTFQ12830 3046 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 EP300Q09472 2414 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 IQANK1A0A1B0GTG1 560 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 TLDC2A0PJX2 215 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SMIM23A6NLE4 172 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 B4DGG1 531 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 QSOX1O00391 747 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 RGS16O15492 202 aaPredicted RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SIGLEC6O43699 453 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SH3BP5O60239 455 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SNX2O60749 519 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 NIPSNAP2O75323 286 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 KRT37O76014 449 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 KRT38O76015 456 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 TRIM16O95361 564 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 EML2O95834 649 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 FTH1P02794 183 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 ESR1P03372 595 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 PKMP14618 531 aaKnown RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 VCLP18206 1134 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 GP5P40197 560 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 GRK6P43250 576 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 CLCNKAP51800 687 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 CSE1LP55060 971 aaKnown RBP12.79□□□□□ -0.36
VPS33A-202ENST00000451053 DMPKQ09013 629 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 C6orf132Q5T0Z8 1188 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 LVRNQ6Q4G3 990 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 ADGRD1Q6QNK2 874 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 GALNT7Q86SF2 657 aa12.79□□□□□ -0.36
VPS33A-202ENST00000451053 SDR16C5Q8N3Y7 309 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms