RNA–Protein interactions for RNA: ENST00000450169.6

LSM5-208, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM5, Length 2,258 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-208ENST00000450169 LETMD1Q6P1Q0 360 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 SCARA5Q6ZMJ2 495 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 PLEKHM3Q6ZWE6 761 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 B3GNT8Q7Z7M8 397 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 TMEM135Q86UB9 458 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 CDH24Q86UP0 819 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 KCNMB4Q86W47 210 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 ZC3HC1Q86WB0 502 aaKnown RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 PROSER1Q86XN7 944 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 OR8H2Q8N162 312 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 MIER2Q8N344 545 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 ZMIZ2Q8NF64 920 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 FBLIM1Q8WUP2 373 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 RXFP2Q8WXD0 754 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 GMCL1Q96IK5 515 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 FERD3LQ96RJ6 166 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 RBM4BQ9BQ04 359 aaKnown RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 RBM4Q9BWF3 364 aaKnown RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 ERVK13-1Q9NX77 482 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 USE1Q9NZ43 259 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 CCDC59Q9P031 241 aaKnown RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 PCDH10Q9P2E7 1040 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 STOML2Q9UJZ1 356 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 MAGED2Q9UNF1 606 aaPredicted RBP8.52□□□□□ -1.05
LSM5-208ENST00000450169 ACOT9Q9Y305 439 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 PCDHGB2Q9Y5G2 931 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 KCNE2Q9Y6J6 123 aa8.52□□□□□ -1.05
LSM5-208ENST00000450169 NEMP2A6NFY4 417 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 C2CD4BA6NLJ0 364 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 I3L521 148 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 BCKDKO14874 412 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FZD6O60353 706 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 USP2O75604 605 aaPredicted RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 HLA-DOAP06340 250 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 POU3F3P20264 500 aaPredicted RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 MSH3P20585 1137 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 ATP5F1P24539 256 aaPredicted RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 CSTF2P33240 577 aaKnown RBP eCLIP8.51□□□□□ -1.05
LSM5-208ENST00000450169 GNPDA1P46926 289 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 EIF1AXP47813 144 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 SOX9P48436 509 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 NR2C2P49116 596 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 NFYCQ13952 458 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FAM83EQ2M2I3 478 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 BTBD16Q32M84 506 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FUT11Q495W5 492 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FAM98BQ52LJ0 330 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 SULT1C3Q6IMI6 304 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FAM171BQ6P995 826 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 TMEM65Q6PI78 240 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 CYHR1Q6ZMK1 362 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 TCTE3Q8IZS6 198 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 HS3ST5Q8IZT8 346 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 SPATA6LQ8N4H0 392 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 OR10T2Q8NGX3 314 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 HERVK_113Q902F9 699 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 LPAR1Q92633 364 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 SLC38A4Q969I6 547 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 C19orf60Q96EN9 201 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 NSMCE2Q96MF7 247 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 MRPL57Q9BQC6 102 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 SNRNP25Q9BV90 132 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 MRM3Q9HC36 420 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 SCN3BQ9NY72 215 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 CPSF3Q9UKF6 684 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 SNX7Q9UNH6 387 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 USP22Q9UPT9 525 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 KLHL20Q9Y2M5 609 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 LYVE1Q9Y5Y7 322 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 OAS3Q9Y6K5 1087 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 UTRNP46939 3433 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 A0A0U1RQS6 177 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 OR2A25A4D2G3 310 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 E5RI56 91 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 TOR1AO14656 332 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 AKR7A2O43488 359 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 RGS10O43665 173 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 HS6ST1O60243 411 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 KPNA6O60684 536 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 OR2B3O76000 313 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FTH1P02794 183 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 PRKCBP05771 671 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 LCKP06239 509 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 ACADMP11310 421 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 FOSL1P15407 271 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 ZNF30P17039 623 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 PSMB4P28070 264 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 GZMKP49863 264 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 EEFSECP57772 596 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 MYL6P60660 151 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 SNRPD2P62316 118 aaKnown RBP8.51□□□□□ -1.05
LSM5-208ENST00000450169 IL1RL1Q01638 556 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 RAPSNQ13702 412 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 GNA13Q14344 377 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 ZNF460Q14592 562 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 DDR2Q16832 855 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 AAK1Q2M2I8 961 aa8.51□□□□□ -1.05
LSM5-208ENST00000450169 PLA2G4EQ3MJ16 856 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms