RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PCDHB9Q9Y5E1 797 aa12.25□□□□□ -0.45
UBE3B-204ENST00000449510 PCNTO95613 3336 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ASCC3Q8N3C0 2202 aaKnown RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SERPINB7O75635 380 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SEMA3DO95025 777 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 MLYCDO95822 493 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 KCNC1P48547 511 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 EMP3P54852 163 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 OR2B6P58173 313 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ARPC4P59998 168 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 FKBP1AP62942 108 aaKnown RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 APOFQ13790 326 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 GTDC1Q4AE62 458 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 TECRLQ5HYJ1 363 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 INTS11Q5TA45 600 aaKnown RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 DCLRE1AQ6PJP8 1040 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 TBPL2Q6SJ96 375 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 FAM151BQ6UXP7 276 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 DEFB132Q7Z7B7 95 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 C14orf80Q86SX3 495 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 FAM217AQ8IXS0 508 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ADGRG5Q8IZF4 528 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CLDN19Q8N6F1 224 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 C19orf18Q8NEA5 215 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 TRPM4Q8TD43 1214 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 MED8Q96G25 268 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 YME1L1Q96TA2 773 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 NPY6RQ99463 290 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SLC30A3Q99726 388 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 TIGARQ9NQ88 270 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF490Q9ULM2 529 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 GIT1Q9Y2X7 761 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CPQQ9Y646 472 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 RRN3P2A6NIE6 340 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 PLSCR1O15162 318 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 RGS14O43566 566 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 PLOD3O60568 738 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 LCKP06239 509 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ODC1P11926 461 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 MC4RP32245 332 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CEP78Q5JTW2 689 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 FKBP1CQ5VVH2 108 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 DOK6Q6PKX4 331 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CYP20A1Q6UW02 462 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 KIAA0408Q6ZU52 694 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SPATC1Q76KD6 591 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SYT12Q8IV01 421 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SLC34A3Q8N130 599 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 LIX1Q8N485 282 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 OR52B6Q8NGF0 335 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SH3YL1Q96HL8 342 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ASB2Q96Q27 587 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 RANBP9Q96S59 729 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CNPPD1Q9BV87 410 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 NEK6Q9HC98 313 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 UCKL1Q9NWZ5 548 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ARIH1Q9Y4X5 557 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 MATN3O15232 486 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SLC22A2O15244 555 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CTSKP43235 329 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 IL18R1Q13478 541 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 RFTN1Q14699 578 aaPredicted RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 RNASE12Q5GAN4 147 aaKnown RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ARMC12Q5T9G4 340 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 PDE12Q6L8Q7 609 aaKnown RBP12.24□□□□□ -0.45
UBE3B-204ENST00000449510 RRM2BQ7LG56 351 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 CDH24Q86UP0 819 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 TMEM126BQ8IUX1 230 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 DEPDC4Q8N2C3 294 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SLCO4A1Q96BD0 722 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 NACC2Q96BF6 587 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 LGALS12Q96DT0 336 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 HDHD2Q9H0R4 259 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 IRF2BPLQ9H1B7 796 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 SNTG1Q9NSN8 517 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 ARID1AO14497 2285 aa12.24□□□□□ -0.45
UBE3B-204ENST00000449510 C5orf58C9J3I9 102 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 E9PAM4 449 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 MT-ND2P03891 347 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 COX7A2P14406 83 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 THPOP40225 353 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 TOP3AQ13472 1001 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SMU1Q2TAY7 513 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 C18orf21Q32NC0 220 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 INO80DQ53TQ3 878 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 PYDC2Q56P42 97 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 DDX59Q5T1V6 619 aaKnown RBP eCLIP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 ZNF648Q5T619 568 aaPredicted RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 LBX2Q6XYB7 198 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 LEMD2Q8NC56 503 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 GPRC5AQ8NFJ5 357 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 OR7D4Q8NG98 312 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 VPS35Q96QK1 796 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SMIM14Q96QK8 99 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 IL12RB2Q99665 862 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 KIFC1Q9BW19 673 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 DUS2Q9NX74 493 aaKnown RBP12.23□□□□□ -0.45
UBE3B-204ENST00000449510 KLHL3Q9UH77 587 aa12.23□□□□□ -0.45
UBE3B-204ENST00000449510 SPATA2Q9UM82 520 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms