RNA–Protein interactions for RNA: ENST00000448310.1

CBX4-202, Transcript of chromobox 4, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CBX4, Length 718 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-202ENST00000448310 PRAMEF1O95521 474 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 MSH3P20585 1137 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 ATP5OP48047 213 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 TUBB3Q13509 450 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 LARP7Q4G0J3 582 aaKnown RBP eCLIP27.66■■■□□ 2.02
CBX4-202ENST00000448310 BBS12Q6ZW61 710 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 TMEM135Q86UB9 458 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 TC2NQ8N9U0 490 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 SIDT2Q8NBJ9 832 aaKnown RBP27.66■■■□□ 2.02
CBX4-202ENST00000448310 RBM41Q96IZ5 413 aaKnown RBP27.66■■■□□ 2.02
CBX4-202ENST00000448310 SLC41A2Q96JW4 573 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 MAP3K3Q99759 626 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 APOL2Q9BQE5 337 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 WWP1Q9H0M0 922 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 GBA3Q9H227 469 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 SMOXQ9NWM0 555 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 ANAPC2Q9UJX6 822 aa27.66■■■□□ 2.02
CBX4-202ENST00000448310 DNMT3AQ9Y6K1 912 aaPredicted RBP27.66■■■□□ 2.02
CBX4-202ENST00000448310 CCNYL3P0C7X3 344 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 EBLN1P0CF75 366 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 MTHFD1P11586 935 aaKnown RBP27.65■■■□□ 2.02
CBX4-202ENST00000448310 NR1D1P20393 614 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 CASRP41180 1078 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 XRCC4Q13426 336 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 SEPT6Q14141 434 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 LONRF2Q1L5Z9 754 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 LACTB2Q53H82 288 aaPredicted RBP27.65■■■□□ 2.02
CBX4-202ENST00000448310 C11orf63Q6NUN7 778 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 CT55Q8WUE5 264 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 UBXN4Q92575 508 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 INSM2Q96T92 566 aaPredicted RBP27.65■■■□□ 2.02
CBX4-202ENST00000448310 PDE7BQ9NP56 450 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 SEMA5BQ9P283 1151 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 FKBPLQ9UIM3 349 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 RARRES3Q9UL19 164 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 KCTD3Q9Y597 815 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 PCDHA13Q9Y5I0 950 aa27.65■■■□□ 2.02
CBX4-202ENST00000448310 CDC14CA4D256 554 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 APOC4-APOC2K7ER74 178 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 APOC2P02655 101 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 GEMP55040 296 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 DNASE1L3Q13609 305 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 IGFBP7Q16270 282 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 METRNLQ641Q3 311 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 PWWP2BQ6NUJ5 590 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 KLHL35Q6PF15 583 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 OR4K2Q8NGD2 314 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 LHX9Q9NQ69 397 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 PADI1Q9ULC6 663 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 TP53TG5Q9Y2B4 290 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 SBDSQ9Y3A5 250 aaKnown RBP eCLIP27.64■■■□□ 2.02
CBX4-202ENST00000448310 COL12A1Q99715 3063 aa27.64■■■□□ 2.02
CBX4-202ENST00000448310 LCA5LO95447 670 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 LPOP22079 712 aaPredicted RBP27.63■■■□□ 2.01
CBX4-202ENST00000448310 DNTTIP2Q5QJE6 756 aaKnown RBP27.63■■■□□ 2.01
CBX4-202ENST00000448310 CCDC181Q5TID7 509 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 DAAM2Q86T65 1068 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 SPDYE1Q8NFV5 336 aaPredicted RBP27.63■■■□□ 2.01
CBX4-202ENST00000448310 C12orf66Q96MD2 445 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 RUFY1Q96T51 708 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 ASB8Q9H765 288 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 AKIRIN1Q9H9L7 192 aaPredicted RBP27.63■■■□□ 2.01
CBX4-202ENST00000448310 KCND3Q9UK17 655 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 POLHQ9Y253 713 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 NAV2Q8IVL1 2488 aa27.63■■■□□ 2.01
CBX4-202ENST00000448310 MACROD2A1Z1Q3 448 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 OR5K3A6NET4 321 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 MGAT4DA6NG13 374 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 K7EM74 188 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 ANXA9O76027 345 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 NTRK1P04629 796 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 OTUD4Q01804 1114 aaKnown RBP27.62■■■□□ 2.01
CBX4-202ENST00000448310 TAF1AQ15573 450 aaPredicted RBP27.62■■■□□ 2.01
CBX4-202ENST00000448310 ITPRIPL1Q6GPH6 555 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 CYB5D1Q6P9G0 228 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 ACTL9Q8TC94 416 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 ZNF514Q96K75 400 aaPredicted RBP27.62■■■□□ 2.01
CBX4-202ENST00000448310 FAM118BQ9BPY3 351 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 TWSG1Q9GZX9 223 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 HRASLS2Q9NWW9 162 aa27.62■■■□□ 2.01
CBX4-202ENST00000448310 SPTBP11277 2137 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 PIPSLA2A3N6 862 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 C2orf81A6NN90 581 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 CREG1O75629 220 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 SRP72O76094 671 aaKnown RBP27.61■■■□□ 2.01
CBX4-202ENST00000448310 MT-ND3P03897 115 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 PSMB4P28070 264 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 ARCN1P48444 511 aaKnown RBP27.61■■■□□ 2.01
CBX4-202ENST00000448310 ARL4DP49703 201 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 RANBP10Q6VN20 620 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 LILRA3Q8N6C8 439 aaPredicted RBP27.61■■■□□ 2.01
CBX4-202ENST00000448310 FGF21Q9NSA1 209 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 PCDHGA6Q9Y5G7 932 aa27.61■■■□□ 2.01
CBX4-202ENST00000448310 UBA6A0AVT1 1052 aaPredicted RBP27.6■■■□□ 2.01
CBX4-202ENST00000448310 TLCD2A6NGC4 264 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 ADRA1AP35348 466 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 FOXK1P85037 733 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 ACY1Q03154 408 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 SPA17Q15506 151 aa27.6■■■□□ 2.01
CBX4-202ENST00000448310 FAM199XQ6PEV8 388 aaPredicted RBP27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms