RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 OR6K2Q8NGY2 324 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 PARD3BQ8TEW8 1205 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CLEC4CQ8WTT0 213 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SH3KBP1Q96B97 665 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SDCCAG3Q96C92 435 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SLC41A2Q96JW4 573 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 AK8Q96MA6 479 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 RPRD1AQ96P16 312 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 GBP5Q96PP8 586 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SECISBP2Q96T21 854 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 PLCD4Q9BRC7 762 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 GPATCH1Q9BRR8 931 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 NDC1Q9BTX1 674 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 C19orf24Q9BVV8 132 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TBC1D10AQ9BXI6 508 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 WDR26Q9H7D7 661 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 AGPAT3Q9NRZ7 376 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 MOSPD1Q9UJG1 213 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SUFUQ9UMX1 484 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TRBV23OR9-2A0A075B6M9 112 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 FAM237BA0A1B0GVD1 139 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 HRKO00198 91 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 KIF1CO43896 1103 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 PRAMEF2O60811 474 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CLSTN1O94985 981 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 GSRP00390 522 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 IVLP07476 585 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TYRP1P17643 537 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 GM2AP17900 193 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 BMP7P18075 431 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CD58P19256 250 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 HADHAP40939 763 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CCNFP41002 786 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 MAPK9P45984 424 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 GNPDA1P46926 289 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 PPM1FP49593 454 aaPredicted RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 CXCR3P49682 368 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 DNA2P51530 1060 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 RAD23BP54727 409 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 GSDMDP57764 484 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SRSF3P84103 164 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 CLCQ05315 142 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ELP6Q0PNE2 266 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 BST2Q10589 180 aaKnown RBP3.19□□□□□ -1.9
PMS1-215ENST00000447232 NFATC2Q13469 925 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SYCP1Q15431 976 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ZNF394Q53GI3 561 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ZNF385BQ569K4 471 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TMCO4Q5TGY1 634 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SYPL2Q5VXT5 272 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 RETSATQ6NUM9 610 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 BEND5Q7L4P6 421 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 NLRC3Q7RTR2 1065 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ATP6V0D2Q8N8Y2 350 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 XXYLT1Q8NBI6 393 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 KIAA0895Q8NCT3 520 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 HMCESQ96FZ2 354 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CALML4Q96GE6 196 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TGM7Q96PF1 710 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TM6SF2Q9BZW4 377 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ANLNQ9NQW6 1124 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 P4HTMQ9NXG6 502 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 UBP1Q9NZI7 540 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TSPAN16Q9UKR8 245 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 SLC17A4Q9Y2C5 497 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 L3MBTL1Q9Y468 752 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 ACTL7AQ9Y615 435 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 CCDC88CQ9P219 2028 aa3.19□□□□□ -1.9
PMS1-215ENST00000447232 TSPAN11A1L157 253 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 CFAP69A5D8W1 941 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 E9PLN8 166 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 KRIT1O00522 736 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 SMAD7O15105 426 aaKnown RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 RECQL5O94762 991 aaPredicted RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 ZRANB2O95218 330 aaKnown RBP eCLIP3.18□□□□□ -1.95e-9■□□□□ 10.7
PMS1-215ENST00000447232 POP4O95707 220 aaKnown RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 KLK3P07288 261 aaPredicted RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 RHOCP08134 193 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 LCP1P13796 627 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 BRAFP15056 766 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 ERCC5P28715 1186 aaPredicted RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 OTX2P32243 289 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 MMP12P39900 470 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 BUD31P41223 144 aaPredicted RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 AIMP2Q13155 320 aaKnown RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 KIR3DS1Q14943 382 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 NCF4Q15080 339 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 GOLGA7BQ2TAP0 167 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 MYLK3Q32MK0 819 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 ALFQ53S48 1182 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 AGAP7PQ5VUJ5 663 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 ARL6IP4Q66PJ3 421 aaKnown RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 PNCKQ6P2M8 343 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 IYDQ6PHW0 289 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 GDPD4Q6W3E5 623 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 CXorf67Q86X51 503 aaPredicted RBP3.18□□□□□ -1.9
PMS1-215ENST00000447232 ZNF683Q8IZ20 524 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 NECAB1Q8N987 351 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 FBXO18Q8NFZ0 1043 aa3.18□□□□□ -1.9
PMS1-215ENST00000447232 OR7D4Q8NG98 312 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms