RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 THUMPD3Q9BV44 507 aaKnown RBP13.78□□□□□ -0.2
VPS52-212ENST00000445902 ENTPD7Q9NQZ7 604 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 RASSF1Q9NS23 344 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 HOXC10Q9NYD6 342 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 OPTCQ9UBM4 332 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 C3orf18Q9UK00 162 aa13.78□□□□□ -0.2
VPS52-212ENST00000445902 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.78□□□□□ -0.2
VPS52-212ENST00000445902 NDST3O95803 873 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 ZNF286BP0CG31 522 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 PRSS56P0CW18 603 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 TGFB3P10600 412 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 CLK3P49761 638 aaKnown RBP13.77□□□□□ -0.2
VPS52-212ENST00000445902 RBBP7Q16576 425 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 ZNF549Q6P9A3 640 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 RANBP10Q6VN20 620 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 DET1Q7L5Y6 550 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 SYVN1Q86TM6 617 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 PJA1Q8NG27 643 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 OR7G1Q8NGA0 311 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 FAM162AQ96A26 154 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 GJD4Q96KN9 370 aaPredicted RBP13.77□□□□□ -0.2
VPS52-212ENST00000445902 SLC39A8Q9C0K1 460 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 TMEM30AQ9NV96 361 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 IKZF3Q9UKT9 509 aa13.77□□□□□ -0.2
VPS52-212ENST00000445902 NYNRINQ9P2P1 1898 aaKnown RBP13.77□□□□□ -0.2
VPS52-212ENST00000445902 H0Y626 953 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 AP3D1O14617 1153 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 TRIM16O95361 564 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 GRK3P35626 688 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 GGT5P36269 586 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 DCTP40126 519 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 SCAPQ12770 1279 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 LCP2Q13094 533 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 ACOX1Q15067 660 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 SOWAHCQ53LP3 525 aaPredicted RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 INTS6LQ5JSJ4 861 aaKnown RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 CES5AQ6NT32 575 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 DNAH12Q6ZR08 3092 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 DCP2Q8IU60 420 aaKnown RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 OR2T12Q8NG77 320 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 ZBED3Q96IU2 234 aaPredicted RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 ZNF583Q96ND8 569 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 IKZF5Q9H5V7 419 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 FAM124BQ9H5Z6 455 aaPredicted RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 RNF167Q9H6Y7 350 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 DOCK1Q14185 1865 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 M0QX08 132 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 CCRL2O00421 344 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 RECQL4O94761 1208 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 DNTTP04053 509 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 EDNRBP24530 442 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 HCAR3P49019 387 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 NFKB2Q00653 900 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 TRAF3Q13114 568 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 SLC14A2Q15849 920 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 ZNF404Q494X3 552 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 SPATS1Q496A3 300 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 SNAP47Q5SQN1 464 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 GDPD3Q7L5L3 318 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 FBXO39Q8N4B4 442 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 LRRC52Q8N7C0 313 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 CDYL2Q8N8U2 506 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 CHST13Q8NET6 341 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 UGT2B28Q9BY64 529 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 NFKBIZQ9BYH8 718 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 KAT8Q9H7Z6 458 aaKnown RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 PLSCR3Q9NRY6 295 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 SMPD4Q9NXE4 827 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 VAPAQ9P0L0 249 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 TMEFF2Q9UIK5 374 aaPredicted RBP13.77□□□□□ -0.21
VPS52-212ENST00000445902 OSGIN1Q9UJX0 560 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 ZNF225Q9UK10 706 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 ZNF221Q9UK13 617 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 RNF112Q9ULX5 631 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 FAM50BQ9Y247 325 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 ORC6Q9Y5N6 252 aa13.77□□□□□ -0.21
VPS52-212ENST00000445902 PDCD11Q14690 1871 aaKnown RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 TYW5A2RUC4 315 aaKnown RBP13.76□□□□□ -0.21
VPS52-212ENST00000445902 ASB14A6NK59 587 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 CACNG3O60359 315 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 MAFKO60675 156 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 CYP11A1P05108 521 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 CCDC159P0C7I6 412 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 DAOAP59103 153 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 PRKG2Q13237 762 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 FAM214AQ32MH5 1076 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 ATAD3CQ5T2N8 411 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 AHSA2Q719I0 299 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 SPATA19Q7Z5L4 167 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 NECAB2Q7Z6G3 386 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 LACC1Q8IV20 430 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 ARHGAP12Q8IWW6 846 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 EID3Q8N140 333 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 MTMR14Q8NCE2 650 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 SLC10A4Q96EP9 437 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 TNIP3Q96KP6 325 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 TBATAQ96M53 351 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 SLC9A7Q96T83 725 aa13.76□□□□□ -0.21
VPS52-212ENST00000445902 YME1L1Q96TA2 773 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms