RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 FAM8A1Q9UBU6 413 aa12.59□□□□□ -0.39
PDLIM2-212ENST00000443561 DMGDHQ9UI17 866 aaKnown RBP12.59□□□□□ -0.39
PDLIM2-212ENST00000443561 NEUROG3Q9Y4Z2 214 aa12.59□□□□□ -0.39
PDLIM2-212ENST00000443561 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
PDLIM2-212ENST00000443561 FREM2Q5SZK8 3169 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 IGHV1OR21-1A0A087WYE8 117 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 ESYT3A0FGR9 886 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 SLC5A10A0PJK1 596 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 D6RAR5 112 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 TRIM16O95361 564 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 S1PR4O95977 384 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 MT-CO3P00414 261 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 RPLP0P05388 317 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 IGF2RP11717 2491 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 XRCC1P18887 633 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 GABRB3P28472 473 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 CD1CP29017 333 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 CCR7P32248 378 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 NSG1P42857 185 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 SLC1A2P43004 574 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 PREPP48147 710 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 RPIAP49247 311 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 SARNPP82979 210 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 MPP1Q00013 466 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 TIAL1Q01085 375 aaKnown RBP eCLIP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 HHEXQ03014 270 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 RPE65Q16518 533 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 BBS9Q3SYG4 887 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 FASTKD1Q53R41 847 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 NKAIN2Q5VXU1 208 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 CASC4Q6P4E1 433 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 ZNF549Q6P9A3 640 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 UNC5AQ6ZN44 842 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 SLITRK4Q8IW52 837 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 MMGT1Q8N4V1 131 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 JPH3Q8WXH2 748 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 GLMNQ92990 594 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 TRIM44Q96DX7 344 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 ZNF514Q96K75 400 aaPredicted RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 TTC25Q96NG3 672 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 TBC1D10AQ9BXI6 508 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 LRRN3Q9H3W5 708 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 EPB41L5Q9HCM4 733 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 SARS2Q9NP81 518 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 WHRNQ9P202 907 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 GALPQ9UBC7 116 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 CPNE7Q9UBL6 633 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 CHMP2BQ9UQN3 213 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 MSRB2Q9Y3D2 182 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 ENTPD2Q9Y5L3 495 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 CFAP20Q9Y6A4 193 aaKnown RBP12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 MAD1L1Q9Y6D9 718 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 FAM169AQ9Y6X4 670 aa12.58□□□□□ -0.4
PDLIM2-212ENST00000443561 KIR2DS5A0A0G2JLQ3 304 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 A0A0G2JNG1 304 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 C17orf113A0A1B0GUU1 675 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 PDZK1P1A8MUH7 402 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 KIR2DS3K7RE56 304 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 AP2A2O94973 939 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 TPBGLP0DKB5 382 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 HOXB3P14651 431 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 ITGB6P18564 788 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 PGAM1P18669 254 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 OGNP20774 298 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 RPS3P23396 243 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 ECHS1P30084 290 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 CKAP4Q07065 602 aaKnown RBP12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 TARDBPQ13148 414 aaKnown RBP eCLIP12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 CTBP1Q13363 440 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 GBX1Q14549 363 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 KIR2DS5Q14953 304 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 CERS6Q6ZMG9 384 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 PCGF5Q86SE9 256 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 TMPRSS12Q86WS5 348 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 CILP2Q8IUL8 1156 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 CACTIN-AS1Q8N1I8 211 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 GIMAP7Q8NHV1 300 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 FBXO25Q8TCJ0 367 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 HEXDCQ8WVB3 486 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 ART4Q93070 314 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 DCUN1D1Q96GG9 259 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 PRR11Q96HE9 360 aaPredicted RBP12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 SLC30A3Q99726 388 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 CCM2Q9BSQ5 444 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 RDH14Q9HBH5 336 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 SLC40A1Q9NP59 571 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 SMYD2Q9NRG4 433 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 ZDHHC18Q9NUE0 388 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 ANAPC5Q9UJX4 755 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 ANGPTL2Q9UKU9 493 aa12.57□□□□□ -0.4
PDLIM2-212ENST00000443561 MAP1BP46821 2468 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 LILRA5A6NI73 299 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 C1QTNF9BB2RNN3 333 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 CFAP99D6REC4 459 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 PRMT5O14744 637 aaPredicted RBP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 KCNJ13O60928 360 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 NIPSNAP2O75323 286 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 CSO75390 466 aaKnown RBP12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 POLBP06746 335 aa12.56□□□□□ -0.4
PDLIM2-212ENST00000443561 C1QTNF9P0C862 333 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms