RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 LRTOMTQ8WZ04 291 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NR4A3Q92570 626 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RORBQ92753 470 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PTERQ96BW5 349 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MTERF3Q96E29 417 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ELMO2Q96JJ3 720 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 C19orf43Q9BQ61 176 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SPATA9Q9BWV2 254 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 FOXQ1Q9C009 403 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ABCG8Q9H221 673 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NOL11Q9H8H0 719 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 CRLF2Q9HC73 371 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RANGRFQ9HD47 186 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 SNX15Q9NRS6 342 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZNF275Q9NSD4 429 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 THUMPD1Q9NXG2 353 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 PCYOX1Q9UHG3 505 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NUFIP1Q9UHK0 495 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 PLA2G4CQ9UP65 541 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MED16Q9Y2X0 877 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMX2Q9Y320 296 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 COL4A3BPQ9Y5P4 624 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 HIVEP2P31629 2446 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TLN2Q9Y4G6 2542 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DSPP15924 2871 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 CCDC88AQ3V6T2 1871 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RTTNQ86VV8 2226 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DIDO1Q9BTC0 2240 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 TRBV23-1A0A0A0MS06 115 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 C17orf113A0A1B0GUU1 675 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ARGFXA6NJG6 315 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PTGES3LE9PB15 166 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CLDN3O15551 220 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BNIP3LO60238 219 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ENTPD3O75355 529 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ALDH1A2O94788 518 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RASGRP1O95267 797 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 POP4O95707 220 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 CLIC3O95833 236 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 WDPCPO95876 746 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ADH1CP00326 375 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TIMP1P01033 207 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 IL6P05231 212 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 RPS17P08708 135 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 SUPT20HL2P0C7V6 817 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 FGFR1P11362 822 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ACADLP28330 430 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GSTM5P46439 218 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LEPRP48357 1165 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 HARS2P49590 506 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 PSMD4P55036 377 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 KCNK10P57789 538 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NOMO3P69849 1222 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DEFA5Q01523 94 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CSTF1Q05048 431 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 NOMO1Q15155 1222 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 POU4F3Q15319 338 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MGAT5BQ3V5L5 792 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MIIPQ5JXC2 388 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BRMS1LQ5PSV4 323 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 IFIT1BQ5T764 474 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 AADACL4Q5VUY2 407 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 C3orf33Q6P1S2 294 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 C16orf46Q6P387 395 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 FOXR2Q6PJQ5 311 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZYG11AQ6WRX3 759 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 BBS12Q6ZW61 710 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CHMP1BQ7LBR1 199 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 MILR1Q7Z6M3 343 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LINC00523Q86TU6 105 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZC3HC1Q86WB0 502 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 SLC13A5Q86YT5 568 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZDHHC17Q8IUH5 632 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM126BQ8IUX1 230 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 LACC1Q8IV20 430 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NAT16Q8N8M0 369 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KREMEN2Q8NCW0 462 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 OR7D4Q8NG98 312 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 OR6F1Q8NGZ6 308 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 AKR7LQ8NHP1 331 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SHKBP1Q8TBC3 707 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 CHURC1Q8WUH1 139 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 SYN2Q92777 582 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 LPPQ93052 612 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMEM68Q96MH6 324 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 NECTIN4Q96NY8 510 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 FYTTD1Q96QD9 318 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 TAAR1Q96RJ0 339 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 PIGUQ9H490 435 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 IL23AQ9NPF7 189 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 OLAHQ9NV23 265 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ERAP1Q9NZ08 941 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 DTLQ9NZJ0 730 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 KLK14Q9P0G3 267 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 IFT80Q9P2H3 777 aaPredicted RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 GMPR2Q9P2T1 348 aaKnown RBP2.75□□□□□ -1.97
LIG4-203ENST00000442234 CACNG4Q9UBN1 327 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 GJD2Q9UKL4 321 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 TMPRSS11EQ9UL52 423 aa2.75□□□□□ -1.97
LIG4-203ENST00000442234 ZMIZ1Q9ULJ6 1067 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms