RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 GLIS1Q8NBF1 620 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 OR4L1Q8NH43 312 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 HM13Q8TCT9 377 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 HDAC10Q969S8 669 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 ZDHHC12Q96GR4 267 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 NAF1Q96HR8 494 aaKnown RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 MS4A14Q96JA4 679 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC74BQ96LY2 380 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 C12orf66Q96MD2 445 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 TAAR9Q96RI9 348 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 TSSK1BQ9BXA7 367 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 AP1M1Q9BXS5 423 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 KCNF1Q9H3M0 494 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 SLC40A1Q9NP59 571 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 SCHIP1Q9P0W5 487 aaPredicted RBP10.26□□□□□ -0.77
MCF2L-216ENST00000439475 PDP2Q9P2J9 529 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 SNX12Q9UMY4 172 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 PSMD13Q9UNM6 376 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 LHX6Q9UPM6 363 aa10.26□□□□□ -0.77
MCF2L-216ENST00000439475 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 IGLV3-16A0A075B6K0 115 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 MAGEB16A2A368 324 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 CCDC162PA2VCL2 907 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 PRR19A6NJB7 356 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 OR52A4PA6NMU1 304 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 A8MU76 341 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 KLK10O43240 276 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 GOT2P00505 430 aaKnown RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 FTH1P02794 183 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 HGFP14210 728 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 TYRP1P17643 537 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 ITIH1P19827 911 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 MPSTP25325 297 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 SLC5A2P31639 672 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 GRIA1P42261 906 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 PAFAH1B1P43034 410 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 FNTAP49354 379 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 VPS41P49754 854 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 CDKN1CP49918 316 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 RAB15P59190 212 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 GNG11P61952 73 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 PLOD1Q02809 727 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 GPS1Q13098 491 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 RPA4Q13156 261 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 C16orf72Q14CZ0 275 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 PLCL1Q15111 1095 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 TRIP13Q15645 432 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 CYP1B1Q16678 543 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 COL28A1Q2UY09 1125 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 ARMC6Q6NXE6 501 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 CYB5D1Q6P9G0 228 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 TMPRSS9Q7Z410 1059 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 RCBTB1Q8NDN9 531 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 USP7Q93009 1102 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 SGSM3Q96HU1 749 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 ASPSCR1Q9BZE9 553 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 WWP1Q9H0M0 922 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 CHRAC1Q9NRG0 131 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 IMP3Q9NV31 184 aaKnown RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 WDR70Q9NW82 654 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 FAM8A1Q9UBU6 413 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 WDR37Q9Y2I8 494 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 ACACAQ13085 2346 aa10.25□□□□□ -0.77
MCF2L-216ENST00000439475 COL27A1Q8IZC6 1860 aaPredicted RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 MAP1BP46821 2468 aaKnown RBP10.25□□□□□ -0.77
MCF2L-216ENST00000439475 CACNA1BQ00975 2339 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 A0A1W2PNU3 283 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 EFCAB7A8K855 629 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 B4E171 279 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 AGRPO00253 132 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 LIN7AO14910 233 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 TOX3O15405 576 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 CAPN5O15484 640 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 PHF2O75151 1096 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 MTHFD1P11586 935 aaKnown RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 PAMP19021 973 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 FOXN2P32314 431 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 TSPAN7P41732 249 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 CD151P48509 253 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 ARSDP51689 593 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 CFHR1Q03591 330 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 ACVR1Q04771 509 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 GPR18Q14330 331 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 DBN1Q16643 649 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 DCAF12Q5T6F0 453 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 FAM83HQ6ZRV2 1179 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 PCGF5Q86SE9 256 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 SDCCAG8Q86SQ7 713 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 FAM129CQ86XR2 697 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 SPACA3Q8IXA5 215 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 OR13J1Q8NGT2 312 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 RUNDC3BQ96NL0 473 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 TEFMQ96QE5 360 aaKnown RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 FERD3LQ96RJ6 166 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 INSM2Q96T92 566 aaPredicted RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 ZPBPQ9BS86 351 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 RAB33BQ9H082 229 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 COG4Q9H9E3 785 aa10.24□□□□□ -0.77
MCF2L-216ENST00000439475 MRM3Q9HC36 420 aaKnown RBP10.24□□□□□ -0.77
MCF2L-216ENST00000439475 CATSPERZQ9NTU4 200 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms