RNA–Protein interactions for RNA: ENST00000439316.6

CLCNKA-203, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2 BASIC

Gene CLCNKA, Length 1,997 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-203ENST00000439316 CR2P20023 1033 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SOX11P35716 441 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TMED1Q13445 227 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 ATP6AP1LQ52LC2 224 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PSAPL1Q6NUJ1 521 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 FUT10Q6P4F1 479 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 ELMSAN1Q6PJG2 1045 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 DLEU7Q6UYE1 221 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 Q6ZSR9 355 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 KCTD8Q6ZWB6 473 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PIANPQ8IYJ0 282 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 CFAP52Q8N1V2 620 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PNPT1Q8TCS8 783 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 PPP1R14BQ96C90 147 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 RMDN1Q96DB5 314 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 LINGO1Q96FE5 620 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 SEPHS2Q99611 448 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TMEM175Q9BSA9 504 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 ZBED2Q9BTP6 218 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TDRD1Q9BXT4 1180 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 TLR9Q9NR96 1032 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 DNAAF2Q9NVR5 837 aaKnown RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 RHBDL2Q9NX52 303 aa16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 UBA2Q9UBT2 640 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 ARIH1Q9Y4X5 557 aaPredicted RBP16.18■□□□□ 0.18
CLCNKA-203ENST00000439316 UPK1AO00322 258 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 ARNTLO00327 626 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 KIAA0355O15063 1070 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 INSIG1O15503 277 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 TULP3O75386 442 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 PRSS23O95084 383 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 CPNE6O95741 557 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 ERVPABLB-1P60509 514 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 IL2P60568 153 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 CTXN3Q4LDR2 81 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 GPR107Q5VW38 600 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 GLYATQ6IB77 296 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 FAM117BQ6P1L5 589 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 SFRP1Q8N474 314 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 CDYL2Q8N8U2 506 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 PDPRQ8NCN5 879 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 BCL7CQ8WUZ0 217 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 EEF1AKMT1Q8WVE0 214 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 ESAMQ96AP7 390 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 CNDP2Q96KP4 475 aaKnown RBP16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 RNF145Q96MT1 663 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 TUBA1CQ9BQE3 449 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 CCSER2Q9H7U1 834 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 NTN4Q9HB63 628 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 CD274Q9NZQ7 290 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 TMEM9Q9P0T7 183 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 V9GYQ6 96 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 ABHD14A-ACY1A0A1B0GW23 586 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 TMX2-CTNND1H3BSU7 103 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 OR1I1O60431 355 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 ACRP10323 421 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 HMOX2P30519 316 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 SLC6A4P31645 630 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 TTPAP49638 278 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 KPNA1P52294 538 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 DEFB103AP81534 67 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 LETMD1Q6P1Q0 360 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 TMEM26Q6ZUK4 368 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 DTWD1Q8N5C7 304 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 OR52B6Q8NGF0 335 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 KCNJ9Q92806 393 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 SMIM14Q96QK8 99 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 NUDT4Q9NZJ9 180 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 IFT80Q9P2H3 777 aaPredicted RBP16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 FKBPLQ9UIM3 349 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 PCDHGA11Q9Y5H2 935 aa16.17■□□□□ 0.18
CLCNKA-203ENST00000439316 ALBP02768 609 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 ZDHHC11BP0C7U3 371 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 LPOP22079 712 aaPredicted RBP16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 MC4RP32245 332 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 ALDH7A1P49419 539 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 SCNN1BP51168 640 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 KCNQ1P51787 676 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 CLCN4P51793 760 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 GRSF1Q12849 480 aaKnown RBP eCLIP16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 MRPL58Q14197 206 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 SELPLGQ14242 412 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 AARS2Q5JTZ9 985 aaKnown RBP16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 ZNF773Q6PK81 442 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 Q6ZNX1 250 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 TAS1R1Q7RTX1 841 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 CPNE9Q8IYJ1 553 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 ACTL8Q9H568 366 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 PIF1Q9H611 641 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 NEUROG3Q9Y4Z2 214 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 COL4A6Q14031 1691 aa16.16■□□□□ 0.18
CLCNKA-203ENST00000439316 A0A1W2PPW3 197 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 OR6C75A6NL08 312 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 H3BNC9 293 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 ANKRD28O15084 1053 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 PFDN6O15212 129 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 MAGEB3O15480 346 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 KDELR3O43731 214 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 TLR5O60602 858 aa16.15■□□□□ 0.18
CLCNKA-203ENST00000439316 YAP1P46937 504 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms