RNA–Protein interactions for RNA: ENST00000437737.3

LINC01088-201, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 5 BASIC

Gene LINC01088, Length 973 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-201ENST00000437737 ETNK2Q9NVF9 386 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CHKBQ9Y259 395 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 TTLL3Q9Y4R7 772 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CROCCQ5TZA2 2017 aa13.8□□□□□ -0.2
LINC01088-201ENST00000437737 CSMD1Q96PZ7 3565 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 IGHV5-51A0A0C4DH38 117 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 HNRNPRO43390 633 aaKnown RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 SCRG1O75711 98 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 TCP1P17987 556 aaKnown RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 COMTP21964 271 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 CA4P22748 312 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 RPL10P27635 214 aaKnown RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 SPINT3P49223 89 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 ITGA1P56199 1179 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 PPP1CAP62136 330 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 RAPSNQ13702 412 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 LAMB3Q13751 1172 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 LRRC38Q5VT99 294 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 CYP4V2Q6ZWL3 525 aaPredicted RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 NT5DC3Q86UY8 548 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 TMEM126BQ8IUX1 230 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 RBM12BQ8IXT5 1001 aaKnown RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 TTC30BQ8N4P2 665 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 CISD2Q8N5K1 135 aaKnown RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 CCHCR1Q8TD31 782 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 SLC41A2Q96JW4 573 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 ZNF514Q96K75 400 aaPredicted RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 MLPHQ9BV36 600 aaPredicted RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 TDRD1Q9BXT4 1180 aaKnown RBP13.79□□□□□ -0.2
LINC01088-201ENST00000437737 SLC40A1Q9NP59 571 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 FGF21Q9NSA1 209 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 EPHA6Q9UF33 1036 aa13.79□□□□□ -0.2
LINC01088-201ENST00000437737 OR52A4PA6NMU1 304 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 KMOO15229 486 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 SLC25A14O95258 325 aaPredicted RBP13.78□□□□□ -0.2
LINC01088-201ENST00000437737 FTCDO95954 541 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 KLK3P07288 261 aaPredicted RBP13.78□□□□□ -0.2
LINC01088-201ENST00000437737 SERPINB6P35237 376 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 PCK1P35558 622 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 CETN2P41208 172 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 DRG2P55039 364 aaKnown RBP13.78□□□□□ -0.2
LINC01088-201ENST00000437737 DSC2Q02487 901 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 GPS2Q13227 327 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 KYNUQ16719 465 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 ANKRD20A8PQ5CZ79 823 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 IZUMO3Q5VZ72 239 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 LRRTM4Q86VH4 590 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 ENDOVQ8N8Q3 282 aaKnown RBP13.78□□□□□ -0.2
LINC01088-201ENST00000437737 TMEM102Q8N9M5 508 aaPredicted RBP13.78□□□□□ -0.2
LINC01088-201ENST00000437737 ADAMTS17Q8TE56 1095 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 SPATA16Q9BXB7 569 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 RAB33BQ9H082 229 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 CHST8Q9H2A9 424 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 RNF14Q9UBS8 474 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 SLC23A2Q9UGH3 650 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 HYOU1Q9Y4L1 999 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 SAR1BQ9Y6B6 198 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 FBN2P35556 2912 aa13.78□□□□□ -0.2
LINC01088-201ENST00000437737 GPR89AB7ZAQ6 455 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 F5H423 210 aaPredicted RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 CES2O00748 559 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 JCHAINP01591 159 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 GPR89BP0CG08 455 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 PRF1P14222 555 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 BRAFP15056 766 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 ZNF7P17097 686 aaPredicted RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 IDSP22304 550 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 CTNNA2P26232 953 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 GRNP28799 593 aaKnown RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 SSR1P43307 286 aaKnown RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 RRADP55042 308 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 SMTNL2Q2TAL5 461 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 PLEKHN1Q494U1 663 aaPredicted RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 ODF2Q5BJF6 829 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 ALS2CLQ60I27 953 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 ABRAXAS1Q6UWZ7 409 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 CERS6Q6ZMG9 384 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 MED25Q71SY5 747 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 POLNQ7Z5Q5 900 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 ADGRG6Q86SQ4 1221 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 TEX26Q8N6G2 289 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 HSPH1Q92598 858 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 HES6Q96HZ4 224 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 PBKQ96KB5 322 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 BTBD6Q96KE9 485 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 RANBP9Q96S59 729 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 LYSMD1Q96S90 227 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 SMAD5Q99717 465 aaKnown RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 MAP3K3Q99759 626 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 TIMM29Q9BSF4 260 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 ILKAPQ9H0C8 392 aaPredicted RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 PCDH9Q9HC56 1237 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 TRIM39Q9HCM9 518 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 DDX56Q9NY93 547 aaKnown RBP13.77□□□□□ -0.21
LINC01088-201ENST00000437737 SNX12Q9UMY4 172 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 PCDHA3Q9Y5H8 950 aa13.77□□□□□ -0.21
LINC01088-201ENST00000437737 UBA6A0AVT1 1052 aaPredicted RBP13.76□□□□□ -0.21
LINC01088-201ENST00000437737 RGSL1A5PLK6 1076 aa13.76□□□□□ -0.21
LINC01088-201ENST00000437737 PSTPIP1O43586 416 aa13.76□□□□□ -0.21
LINC01088-201ENST00000437737 URI1O94763 535 aaPredicted RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms