RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 ZNF806P0C7X5 589 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 UGT1A1P22309 533 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PSME3P61289 254 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ARFRP1Q13795 201 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 WDR93Q6P2C0 686 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PPP1R14BQ96C90 147 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ABCB10Q9NRK6 738 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 KLRF1Q9NZS2 232 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PRORSD1PA6NEY8 169 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 MAP3K8P41279 467 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 SLC25A52Q3SY17 297 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 TMPPEQ6ZT21 453 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 C12orf40Q86WS4 652 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 CLHC1Q8NHS4 586 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 GPR151Q8TDV0 419 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PTGES2Q9H7Z7 377 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 AGO3Q9H9G7 860 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 RC3H2Q9HBD1 1191 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 TIGARQ9NQ88 270 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ITIH1P19827 911 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 SLC1A2P43004 574 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 ANTXR2P58335 489 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 PDCD4Q53EL6 469 aaKnown RBP11.08□□□□□ -0.64
SCN4A-201ENST00000435607 SPDYCQ5MJ68 293 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 TNS4Q8IZW8 715 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 MUC13Q9H3R2 512 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 C11orf49Q9H6J7 331 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 NMUR1Q9HB89 426 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 FBXO5Q9UKT4 447 aa11.08□□□□□ -0.64
SCN4A-201ENST00000435607 HSPA12AO43301 675 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 NDST3O95803 873 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ITGAVP06756 1048 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 PKMP14618 531 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CDK10Q15131 360 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 SDHAF4Q5VUM1 108 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 NIPAL1Q6NVV3 410 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 FUT10Q6P4F1 479 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 NOA1Q8NC60 698 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 TRMT61BQ9BVS5 477 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 WBP11Q9Y2W2 641 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CCRL2O00421 344 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 PITPNM1O00562 1244 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 PDPK1O15530 556 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 COQ9O75208 318 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 IFNA21P01568 189 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ITGA2BP08514 1039 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 C9orf57Q5W0N0 161 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 TBC1D21Q8IYX1 336 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 HM13Q8TCT9 377 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 RTKNQ9BST9 563 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 THUMPD1Q9NXG2 353 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 PLK2Q9NYY3 685 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ASB3Q9Y575 518 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 DNAJA2O60884 412 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 DUSP11O75319 330 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 LGR5O75473 907 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 LINGO3P0C6S8 592 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 SHMT1P34896 483 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 RYKP34925 604 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 WNT3AP56704 352 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ARHGAP40Q5TG30 622 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 SAPCD2Q86UD0 394 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 GPR152Q8TDT2 470 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 DGCR14Q96DF8 476 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CXorf56Q9H5V9 222 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 C14orf105Q9NVL8 296 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 RCOR3Q9P2K3 495 aaPredicted RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 FAM240BA0A1B0GVZ2 78 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 MLC1Q15049 377 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 C3orf33Q6P1S2 294 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ZFPM1Q8IX07 1006 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CAMKVQ8NCB2 501 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CAVIN3Q969G5 261 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 MTMR8Q96EF0 704 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 SLC32A1Q9H598 525 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 IFT80Q9P2H3 777 aaPredicted RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 B4GALT7Q9UBV7 327 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CORO1CQ9ULV4 474 aaPredicted RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 MAP4K5Q9Y4K4 846 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 NPEPPSL1A6NEC2 478 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 EOMESO95936 686 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ZBTB48P10074 688 aaPredicted RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 SRCP12931 536 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 CASP5P51878 434 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 MLIPQ5VWP3 458 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 TSHZ1Q6ZSZ6 1077 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 FBXW8Q8N3Y1 598 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ATAD1Q8NBU5 361 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 C7orf57Q8NEG2 295 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 IRGQQ8WZA9 623 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 PRDM12Q9H4Q4 367 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 METTL7AQ9H8H3 244 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 FARSBQ9NSD9 589 aaKnown RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 NUDT4Q9NZJ9 180 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 HES2Q9Y543 173 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 REREQ9P2R6 1566 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 ANXA4P09525 319 aaPredicted RBP11.07□□□□□ -0.64
SCN4A-201ENST00000435607 RARAP10276 462 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 APLP1P51693 650 aa11.07□□□□□ -0.64
SCN4A-201ENST00000435607 TOR1AIP1Q5JTV8 583 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms