RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 KIF2AO00139 706 aaPredicted RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 ZW10O43264 779 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 CSO75390 466 aaKnown RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 USP1O94782 785 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 PBLDP30039 288 aaPredicted RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 TTPAP49638 278 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 GPLD1P80108 840 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 ZFP36L1Q07352 338 aaKnown RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 CBLBQ13191 982 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 SEPT7Q16181 437 aaKnown RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 MSS51Q4VC12 460 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 CASC4Q6P4E1 433 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 MAATS1Q7Z4T9 603 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 LILRA3Q8N6C8 439 aaPredicted RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 SNF8Q96H20 258 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 TRIM56Q9BRZ2 755 aaKnown RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 NRSN2Q9GZP1 204 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 STN1Q9H668 368 aaKnown RBP18■□□□□ 0.47
HLA-F-220ENST00000434407 VPS37BQ9H9H4 285 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 SLC40A1Q9NP59 571 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 POT1Q9NUX5 634 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 ENTPD2Q9Y5L3 495 aa18■□□□□ 0.47
HLA-F-220ENST00000434407 OR52A4PA6NMU1 304 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 EFCAB8A8MWE9 144 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 RAD51CO43502 376 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 PAMP19021 973 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 ALDH4A1P30038 563 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 RPL21P46778 160 aaKnown RBP17.99■□□□□ 0.47
HLA-F-220ENST00000434407 ITGA8P53708 1063 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 EPHA4P54764 986 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 CFHR1Q03591 330 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 C2orf54Q08AI8 447 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 BIRC2Q13490 618 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 RPE65Q16518 533 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 TYSND1Q2T9J0 566 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 CAPRIN2Q6IMN6 1127 aaKnown RBP17.99■□□□□ 0.47
HLA-F-220ENST00000434407 TMEM26Q6ZUK4 368 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 TMPRSS9Q7Z410 1059 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 RBM12BQ8IXT5 1001 aaKnown RBP17.99■□□□□ 0.47
HLA-F-220ENST00000434407 SLC38A3Q99624 504 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 ERP44Q9BS26 406 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-220ENST00000434407 COG4Q9H9E3 785 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 ANAPC5Q9UJX4 755 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 ATXN7L1Q9ULK2 861 aaPredicted RBP17.99■□□□□ 0.47
HLA-F-220ENST00000434407 PCDHB1Q9Y5F3 818 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 RPS6KL1Q9Y6S9 549 aa17.99■□□□□ 0.47
HLA-F-220ENST00000434407 URB1O60287 2271 aaKnown RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 AHCTF1Q8WYP5 2266 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 TRABD2BA6NFA1 517 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 PRMT5O14744 637 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 CPNE6O95741 557 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 VIPP01282 170 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 OR56A5P0C7T3 313 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 RPS3P23396 243 aaKnown RBP eCLIP17.98■□□□□ 0.471e-9■□□□□ 10.3
HLA-F-220ENST00000434407 CCKBRP32239 447 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 HALP42357 657 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 CKAP4Q07065 602 aaKnown RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 DHX9Q08211 1270 aaKnown RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 RPA4Q13156 261 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 RTP5Q14D33 572 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 WHAMMP3Q1A5X7 153 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 DNAJC21Q5F1R6 531 aaKnown RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 MRNIPQ6NTE8 343 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 UNQ6494/PRO21346Q6UXR6 183 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 B3GNT8Q7Z7M8 397 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 LDB1Q86U70 411 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 ZNF761Q86XN6 746 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 SLITRK4Q8IW52 837 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 CFAP206Q8IYR0 622 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 ZNF669Q96BR6 464 aaPredicted RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 STAMBPL1Q96FJ0 436 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 TCF12Q99081 682 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 EBNA1BP2Q99848 306 aaKnown RBP17.98■□□□□ 0.47
HLA-F-220ENST00000434407 DPYSL5Q9BPU6 564 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 P2RY12Q9H244 342 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 OR52A5Q9H2C5 316 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 EPB41L1Q9H4G0 881 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 KCNK4Q9NYG8 393 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 DKK4Q9UBT3 224 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 FAM169AQ9Y6X4 670 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 USP24Q9UPU5 2620 aa17.98■□□□□ 0.47
HLA-F-220ENST00000434407 C1QTNF9BB2RNN3 333 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 F8W8V4 182 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 TMX2-CTNND1H3BSU7 103 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 NDC80O14777 642 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 URI1O94763 535 aaPredicted RBP17.97■□□□□ 0.47
HLA-F-220ENST00000434407 FTH1P02794 183 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 C1QTNF9P0C862 333 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 OGNP20774 298 aaKnown RBP17.97■□□□□ 0.47
HLA-F-220ENST00000434407 ADARP55265 1226 aaKnown RBP17.97■□□□□ 0.47
HLA-F-220ENST00000434407 TUBB2AQ13885 445 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 AMZ1Q400G9 498 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 DUPD1Q68J44 220 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 NEPROQ6NW34 567 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 ZNF574Q6ZN55 896 aaPredicted RBP17.97■□□□□ 0.47
HLA-F-220ENST00000434407 PIM3Q86V86 326 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 LRRC6Q86X45 466 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 TRIM48Q8IWZ4 208 aa17.97■□□□□ 0.47
HLA-F-220ENST00000434407 ZFPM2Q8WW38 1151 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms