RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 GNPTGQ9UJJ9 305 aa15.24■□□□□ 0.03
TREX1-201ENST00000433541 ESYT3A0FGR9 886 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 MED19A0JLT2 244 aaPredicted RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 PRMT5O14744 637 aaPredicted RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 OPA1O60313 960 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 RPLP0P05388 317 aaKnown RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 ADRB1P08588 477 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 JUPP14923 745 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 CSE1LP55060 971 aaKnown RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 CLDN6P56747 220 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 SPANXN3Q5MJ09 141 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 HES3Q5TGS1 186 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 IYDQ6PHW0 289 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 FAM83HQ6ZRV2 1179 aaPredicted RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 CAPN12Q6ZSI9 719 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 TMEM135Q86UB9 458 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 ZNF761Q86XN6 746 aaPredicted RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 SFRP1Q8N474 314 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 MMGT1Q8N4V1 131 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 FBXO36Q8NEA4 188 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 GSDMBQ8TAX9 411 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 WWP1Q9H0M0 922 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 CCDC68Q9H2F9 335 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 SAYSD1Q9NPB0 183 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 IARS2Q9NSE4 1012 aaKnown RBP15.23■□□□□ 0.03
TREX1-201ENST00000433541 KCNK4Q9NYG8 393 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 VPS9D1Q9Y2B5 631 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 PRSS21Q9Y6M0 314 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 FAM169AQ9Y6X4 670 aa15.23■□□□□ 0.03
TREX1-201ENST00000433541 OR52A4PA6NMU1 304 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 IFRD1O00458 451 aaPredicted RBP15.22■□□□□ 0.03
TREX1-201ENST00000433541 SPINK2P20155 84 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 OGNP20774 298 aaKnown RBP15.22■□□□□ 0.03
TREX1-201ENST00000433541 ARNTP27540 789 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 DMPKQ09013 629 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 TMED2Q15363 201 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 MAP9Q49MG5 647 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 HSP90AA5PQ58FG0 334 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 NOA1Q8NC60 698 aaKnown RBP15.22■□□□□ 0.03
TREX1-201ENST00000433541 PYROXD1Q8WU10 500 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 SH3KBP1Q96B97 665 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 C12orf66Q96MD2 445 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 GFM1Q96RP9 751 aaKnown RBP15.22■□□□□ 0.03
TREX1-201ENST00000433541 TCF12Q99081 682 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 EPB41L5Q9HCM4 733 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 SARS2Q9NP81 518 aaKnown RBP15.22■□□□□ 0.03
TREX1-201ENST00000433541 GRHL1Q9NZI5 618 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 CPNE7Q9UBL6 633 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 ACSL5Q9ULC5 683 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 CRYL1Q9Y2S2 319 aa15.22■□□□□ 0.03
TREX1-201ENST00000433541 CFAP20Q9Y6A4 193 aaKnown RBP15.22■□□□□ 0.03
TREX1-201ENST00000433541 ZCWPW2A0A1B0GU75 182 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 C17orf113A0A1B0GUU1 675 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 FAM149AA5PLN7 773 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 E5RI56 91 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 PPM1DO15297 605 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 SGTAO43765 313 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 GSTM1P09488 218 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 ERVK-10P10266 1014 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 FMO4P31512 558 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 SLC1A2P43004 574 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 PREPP48147 710 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 ARCN1P48444 511 aaKnown RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 OR1D5P58170 312 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 CCL7P80098 99 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 INSM1Q01101 510 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 GSTM4Q03013 218 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 CTBP1Q13363 440 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 PLCL1Q15111 1095 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 METRNLQ641Q3 311 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 NAPRTQ6XQN6 538 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 SPRED1Q7Z699 444 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 RAB44Q7Z6P3 723 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 LRRC6Q86X45 466 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 CILP2Q8IUL8 1156 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 IGDCC3Q8IVU1 814 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 PALM2Q8IXS6 379 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 LMNTD2Q8IXW0 634 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 KRT222Q8N1A0 295 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 WDR48Q8TAF3 677 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 FBXO25Q8TCJ0 367 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 SKA2Q8WVK7 121 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 IFT81Q8WYA0 676 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 TMEM159Q96B96 161 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 LINC00615Q96LM1 132 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 DEPDC7Q96QD5 511 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 PANX3Q96QZ0 392 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 SCNM1Q9BWG6 230 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 COG4Q9H9E3 785 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 FBXO6Q9NRD1 293 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 FAM114A2Q9NRY5 505 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 SCHIP1Q9P0W5 487 aaPredicted RBP15.21■□□□□ 0.03
TREX1-201ENST00000433541 RABGEF1Q9UJ41 708 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 CLCA2Q9UQC9 943 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 WDR37Q9Y2I8 494 aa15.21■□□□□ 0.03
TREX1-201ENST00000433541 A6NCN8 305 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 IQCF5A8MTL0 148 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 ESPNB1AK53 854 aa15.2■□□□□ 0.02
TREX1-201ENST00000433541 LIN7AO14910 233 aaPredicted RBP15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms