RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 TRIM55Q9BYV6 548 aa13.94□□□□□ -0.18
SMARCE1-205ENST00000431889 TRIT1Q9H3H1 467 aaKnown RBP13.94□□□□□ -0.18
SMARCE1-205ENST00000431889 TSPY26PQ9H489 355 aa13.94□□□□□ -0.18
SMARCE1-205ENST00000431889 PKP3Q9Y446 797 aa13.94□□□□□ -0.18
SMARCE1-205ENST00000431889 PCDHB3Q9Y5E6 796 aa13.94□□□□□ -0.18
SMARCE1-205ENST00000431889 DOPEY2Q9Y3R5 2298 aa13.94□□□□□ -0.18
SMARCE1-205ENST00000431889 MTSS1O43312 755 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 PRAMEF1O95521 474 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 PRSS56P0CW18 603 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 FGF5P12034 268 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 NELFEP18615 380 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 MSH3P20585 1137 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 DNASE1L3Q13609 305 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 LACTB2Q53H82 288 aaPredicted RBP13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 DNTTIP2Q5QJE6 756 aaKnown RBP13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 CCDC181Q5TID7 509 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 CPZQ66K79 652 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 VSIG1Q86XK7 387 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 OR13C4Q8NGS5 318 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 ZNF398Q8TD17 642 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 EFHD1Q9BUP0 239 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 KLHL25Q9H0H3 589 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 ACTL8Q9H568 366 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 HRASLS2Q9NWW9 162 aa13.93□□□□□ -0.18
SMARCE1-205ENST00000431889 UBA6A0AVT1 1052 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 OR6C74A6NCV1 312 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 STX7O15400 261 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 PSTPIP1O43586 416 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 ZRANB2O95218 330 aaKnown RBP eCLIP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 LCA5LO95447 670 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CCNYL3P0C7X3 344 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 MTHFD1P11586 935 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 PSMB4P28070 264 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CASRP41180 1078 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 ARL4DP49703 201 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CDKN1CP49918 316 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TBX2Q13207 712 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 SEPT6Q14141 434 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 IL11RAQ14626 422 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 GSE1Q14687 1217 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 SLC14A2Q15849 920 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 LDLRAP1Q5SW96 308 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 LCN10Q6JVE6 187 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 WASH2PQ6VEQ5 465 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 BZW1Q7L1Q6 419 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TAB3Q8N5C8 712 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 DDHD1Q8NEL9 900 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 BRSK1Q8TDC3 778 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 ASB8Q9H765 288 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 LHX9Q9NQ69 397 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 WASH6PQ9NQA3 447 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TLK1Q9UKI8 766 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 PADI1Q9ULC6 663 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 SPTBP11277 2137 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CCDC78A2IDD5 438 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 RCCD1A6NED2 376 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CREG1O75629 220 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 POLR2CP19387 275 aaPredicted RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 FOXK1P85037 733 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 MC1RQ01726 317 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 MPP3Q13368 585 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CFAP206Q8IYR0 622 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 KATNAL2Q8IYT4 538 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TC2NQ8N9U0 490 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 SLC38A9Q8NBW4 561 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 OR4E2Q8NGC2 313 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 CCDC110Q8TBZ0 833 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TLR10Q9BXR5 811 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TRABDQ9H4I3 376 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 PIH1D1Q9NWS0 290 aaKnown RBP13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 TUBD1Q9UJT1 453 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 RARRES3Q9UL19 164 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 MAN2B2Q9Y2E5 1009 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 PCDHA13Q9Y5I0 950 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 DUSP10Q9Y6W6 482 aa13.92□□□□□ -0.18
SMARCE1-205ENST00000431889 NBASA2RRP1 2371 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 SGTAO43765 313 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 HLA-DPA1P20036 260 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 KPNA2P52292 529 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 OTUD4Q01804 1114 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 SRSF1Q07955 248 aaKnown RBP eCLIP13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 IL10RAQ13651 578 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 MAP7Q14244 749 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 METRNLQ641Q3 311 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 CNGA4Q8IV77 575 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 RCOR2Q8IZ40 523 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 SLC41A2Q96JW4 573 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 RMDN2Q96LZ7 410 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 ZCCHC2Q9C0B9 1178 aaKnown RBP13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 GBA3Q9H227 469 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 PDE7BQ9NP56 450 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 FGF21Q9NSA1 209 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 SOHLH2Q9NX45 425 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 LUZP4Q9P127 313 aa13.91□□□□□ -0.18
SMARCE1-205ENST00000431889 OR5K3A6NET4 321 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 TOX3O15405 576 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 KCNN4O15554 427 aa13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 SRP72O76094 671 aaKnown RBP13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 LPOP22079 712 aaPredicted RBP13.9□□□□□ -0.18
SMARCE1-205ENST00000431889 DMPKQ09013 629 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms