RNA–Protein interactions for RNA: ENST00000431127.1

CTDSP1-203, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-203ENST00000431127 MPP5Q8N3R9 675 aa17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 CCDC97Q96F63 343 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 ATXN7L3BQ96GX2 97 aa17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 LIN37Q96GY3 246 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 SERPINB12Q96P63 405 aa17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 CATSPERZQ9NTU4 200 aa17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 ZNF624Q9P2J8 865 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 ATXN7L1Q9ULK2 861 aaPredicted RBP17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 WDR37Q9Y2I8 494 aa17.04■□□□□ 0.32
CTDSP1-203ENST00000431127 CCDC187A0A096LP49 1063 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 OR52A4PA6NMU1 304 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 GOLGA8MH3BSY2 632 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 DNALI1O14645 258 aaPredicted RBP17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 DUX1O43812 170 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 FTH1P02794 183 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 SLC35G4P0C7Q5 338 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 OR56A5P0C7T3 313 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 LSSP48449 732 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 TTPAP49638 278 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 PDX1P52945 283 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 ZFP36L1Q07352 338 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 CYP4F3Q08477 520 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 DHX34Q14147 1143 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 CLCA4Q14CN2 919 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 RNASEH2BQ5TBB1 312 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 TMEM26Q6ZUK4 368 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 USP53Q70EK8 1073 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 CFAP206Q8IYR0 622 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 CLDN19Q8N6F1 224 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 WDR36Q8NI36 951 aaKnown RBP17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 NAT14Q8WUY8 206 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 TMEM159Q96B96 161 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 MFSD3Q96ES6 412 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 FOXP3Q9BZS1 431 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 POLR1BQ9H9Y6 1135 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 RDH14Q9HBH5 336 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 SLC40A1Q9NP59 571 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 PSMD13Q9UNM6 376 aa17.03■□□□□ 0.32
CTDSP1-203ENST00000431127 UNC13CQ8NB66 2214 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 FAM237BA0A1B0GVD1 139 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 SMAPO00193 183 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 PFDN6O15212 129 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 VAPBO95292 243 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 MAGEA3P43357 314 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 PPM1FP49593 454 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 RPA4Q13156 261 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 RPE65Q16518 533 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 KIAA0930Q6ICG6 404 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 MRNIPQ6NTE8 343 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 WDR74Q6RFH5 385 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 MICALCLQ6ZW33 695 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 B3GNT8Q7Z7M8 397 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 SDCCAG8Q86SQ7 713 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 ZNF761Q86XN6 746 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 PROSER1Q86XN7 944 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 JAMLQ86YT9 394 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 OR4D9Q8NGE8 314 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 ZFPM2Q8WW38 1151 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 NUDT22Q9BRQ3 303 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 TSSK1BQ9BXA7 367 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 ZMYND15Q9H091 742 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 EPB41L5Q9HCM4 733 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 AKAP7Q9P0M2 348 aaPredicted RBP17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 PCDHGA8Q9Y5G5 932 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 FAM208BQ5VWN6 2430 aa17.02■□□□□ 0.32
CTDSP1-203ENST00000431127 NDC80O14777 642 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 MPOP05164 745 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 POLBP06746 335 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 MTHFD1P11586 935 aaKnown RBP17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 MLLT3P42568 568 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 GABREP78334 506 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 PLOD1Q02809 727 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 TRA2AQ13595 282 aaKnown RBP eCLIP17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 PHF19Q5T6S3 580 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 NKAIN2Q5VXU1 208 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 IZUMO3Q5VZ72 239 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 TMEM71Q6P5X7 295 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 CES3Q6UWW8 571 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 SLITRK4Q8IW52 837 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 SPATA4Q8NEY3 305 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 MDM1Q8TC05 714 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 TRIM44Q96DX7 344 aaPredicted RBP17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 CMKLR1Q99788 373 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 WWP1Q9H0M0 922 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 IMP3Q9NV31 184 aaKnown RBP17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 FAM8A1Q9UBU6 413 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 SATB2Q9UPW6 733 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 HEBP2Q9Y5Z4 205 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 MAD1L1Q9Y6D9 718 aa17.01■□□□□ 0.31
CTDSP1-203ENST00000431127 IFRD1O00458 451 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 PRMT5O14744 637 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 LIN7AO14910 233 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 HGSO14964 777 aaPredicted RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 OR1I1O60431 355 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 NDUFS3O75489 264 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 DXOO77932 396 aaKnown RBP17■□□□□ 0.31
CTDSP1-203ENST00000431127 IVDP26440 423 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 ARNTP27540 789 aa17■□□□□ 0.31
CTDSP1-203ENST00000431127 NDUFS1P28331 727 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms