RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 RPS24P62847 133 aaKnown RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 B3GNT6Q6ZMB0 384 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 TSPAN14Q8NG11 270 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 OR2T12Q8NG77 320 aa11.4□□□□□ -0.59
PTCH1-208ENST00000430669 MAGEE2Q8TD90 523 aaPredicted RBP11.4□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3DA0A087WVF3 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3IA0A087WXS9 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3EA0A087X179 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3KA0A087X1G2 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3FA6NER0 549 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3LB9A6J9 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 HNRNPA1P09651 372 aaKnown RBP eCLIP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3HP0C7X1 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 GPX6P59796 221 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 HEPACAMQ14CZ8 416 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3GQ6DHY5 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3CQ6IPX1 549 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 KLHDC10Q6PID8 442 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBC1D3Q8IZP1 549 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SCLYQ96I15 445 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 MAGEE1Q9HCI5 957 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ATP6V1HQ9UI12 483 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 FKBPLQ9UIM3 349 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 MRTO4Q9UKD2 239 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TRPM6Q9BX84 2022 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ELOVL7A1L3X0 281 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 UBXN8O00124 270 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 PCCBP05166 539 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 JAK1P23458 1154 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ITGA1P56199 1179 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 CYP4X1Q8N118 509 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SIDT2Q8NBJ9 832 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 RHEBL1Q8TAI7 183 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 BTBD9Q96Q07 612 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 MRPS17Q9Y2R5 130 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 KRT36O76013 467 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 CDK14O94921 469 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TSPAN8P19075 237 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 IDSP22304 550 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 CAND1Q86VP6 1230 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 DPP10Q8N608 796 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 PLK2Q9NYY3 685 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SUCOQ9UBS9 1254 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 A0A1W2PRU2 124 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 RNASEH2AO75792 299 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 AP2A2O94973 939 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TBX18O95935 607 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 GALTP07902 379 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 CCNA2P20248 432 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 STC1P52823 247 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 GPM6BQ13491 265 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TRIM60Q495X7 471 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 NAIF1Q69YI7 327 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 HIPK1Q86Z02 1210 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 C7orf61Q8IZ16 206 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 HERC2P3Q9BVR0 1158 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SLC2A11Q9BYW1 496 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 MTRRQ9UBK8 725 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ZNF282Q9UDV7 671 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 RUVBL1Q9Y265 456 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ZMPSTE24O75844 475 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 AMD1P17707 334 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 NDUFS1P28331 727 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 GTF2E2P29084 291 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SUOXP51687 545 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 PRR5P85299 388 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SLC10A7Q0GE19 358 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 FAM13CQ8NE31 585 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 FBXO30Q8TB52 745 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 KIAA1191Q96A73 305 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 WRAP53Q9BUR4 548 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SLC29A3Q9BZD2 475 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 POLR1BQ9H9Y6 1135 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 NMUR1Q9HB89 426 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 HPS4Q9NQG7 708 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 CYTH4Q9UIA0 394 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ADH1BP00325 375 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 FGFR3P22607 806 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 IRF9Q00978 393 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 TRIM25Q14258 630 aaKnown RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SAMD14Q8IZD0 417 aaPredicted RBP11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SIGLEC10Q96LC7 697 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 SEMA6AQ9H2E6 1030 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 PRDM8Q9NQV8 689 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 LCTP09848 1927 aa11.39□□□□□ -0.59
PTCH1-208ENST00000430669 ATP6AP2A0A1C7CYW4 349 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 KLHL33A6NCF5 533 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 BHMG1C9JSJ3 638 aaPredicted RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 SCAMP3O14828 347 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 OR10H2O60403 315 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 ATP6AP2O75787 350 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 PGLSO95336 258 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 NR2F1P10589 423 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 POU1F1P28069 291 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 FOXN2P32314 431 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 RPS6KA3P51812 740 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 STXBP1P61764 594 aaKnown RBP11.38□□□□□ -0.59
PTCH1-208ENST00000430669 COPZ1P61923 177 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 FOLH1Q04609 750 aa11.38□□□□□ -0.59
PTCH1-208ENST00000430669 UBE3AQ05086 875 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms