RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 KLHL35Q6PF15 583 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 CEACAM20Q6UY09 585 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 FAM83HQ6ZRV2 1179 aaPredicted RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 VASH2Q86V25 355 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 DTX1Q86Y01 620 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 LRRC8AQ8IWT6 810 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 IL22RA1Q8N6P7 574 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 CCDC89Q8N998 374 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 OR2L2Q8NH16 312 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 C1orf54Q8WWF1 131 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 JPH3Q8WXH2 748 aaPredicted RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 PMEPA1Q969W9 287 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 ZDHHC12Q96GR4 267 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 C9orf72Q96LT7 481 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 NLE1Q9NVX2 485 aaPredicted RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 PIH1D1Q9NWS0 290 aaKnown RBP17.23■□□□□ 0.35
NUP50-208ENST00000430547 OGFRQ9NZT2 677 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 ACSL5Q9ULC5 683 aa17.23■□□□□ 0.35
NUP50-208ENST00000430547 AGAP14A8MT82 685 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 C9P02748 559 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 ANKRD34CP0C6C1 535 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 ATP1B2P14415 290 aaPredicted RBP17.22■□□□□ 0.35
NUP50-208ENST00000430547 MC2RQ01718 297 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 CDH17Q12864 832 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 SNX1Q13596 522 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 GSE1Q14687 1217 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 OASLQ15646 514 aaKnown RBP17.22■□□□□ 0.35
NUP50-208ENST00000430547 RPE65Q16518 533 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 IRGCQ6NXR0 463 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 PPP1R21Q6ZMI0 780 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 TAS2R42Q7RTR8 314 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 BMPERQ8N8U9 685 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 TRIM58Q8NG06 486 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 GPR150Q8NGU9 434 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 STYXQ8WUJ0 223 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 NAT14Q8WUY8 206 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 RSC1A1Q92681 617 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 C12orf66Q96MD2 445 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 CTRCQ99895 268 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 ZPBPQ9BS86 351 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 WWP1Q9H0M0 922 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 VPS37BQ9H9H4 285 aa17.22■□□□□ 0.35
NUP50-208ENST00000430547 H7C0S8 307 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 POLR1CO15160 346 aaPredicted RBP17.21■□□□□ 0.35
NUP50-208ENST00000430547 TOX3O15405 576 aaPredicted RBP17.21■□□□□ 0.35
NUP50-208ENST00000430547 MTHFD1P11586 935 aaKnown RBP17.21■□□□□ 0.35
NUP50-208ENST00000430547 ACRV1P26436 265 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 PRLHRP49683 370 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 SEPHS1P49903 392 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 FOXM1Q08050 763 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 LAMB3Q13751 1172 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 KRT33BQ14525 404 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 SKIDA1Q1XH10 827 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 KIAA1614Q5VZ46 1190 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 ZNF662Q6ZS27 426 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 OR52K1Q8NGK4 314 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 HM13Q8TCT9 377 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 MAIP1Q8WWC4 291 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 LINC00615Q96LM1 132 aaPredicted RBP17.21■□□□□ 0.35
NUP50-208ENST00000430547 FBXO8Q9NRD0 319 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 ZDHHC3Q9NYG2 299 aa17.21■□□□□ 0.35
NUP50-208ENST00000430547 CFAP20Q9Y6A4 193 aaKnown RBP17.21■□□□□ 0.35
NUP50-208ENST00000430547 ATMQ13315 3056 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 ATRXP46100 2492 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 CCDC78A2IDD5 438 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 EFSO43281 561 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 POLBP06746 335 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 LEPRP48357 1165 aaKnown RBP17.2■□□□□ 0.34
NUP50-208ENST00000430547 ARSDP51689 593 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 CACNG1Q06432 222 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 SRSF6Q13247 344 aaKnown RBP17.2■□□□□ 0.34
NUP50-208ENST00000430547 CACHD1Q5VU97 1274 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 ZNF449Q6P9G9 518 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 FAM92BQ6ZTR7 304 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 SERPINA9Q86WD7 417 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 CFAP206Q8IYR0 622 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 CACNA2D3Q8IZS8 1091 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 NKD1Q969G9 470 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.2■□□□□ 0.34
NUP50-208ENST00000430547 CDKN2AIPNLQ96HQ2 116 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 CCM2Q9BSQ5 444 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 ZNF768Q9H5H4 540 aaKnown RBP17.2■□□□□ 0.34
NUP50-208ENST00000430547 ETNK1Q9HBU6 452 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 RAB6BQ9NRW1 208 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 PAK5Q9P286 719 aa17.2■□□□□ 0.34
NUP50-208ENST00000430547 HEATR9A2RTY3 570 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 RAD1O60671 282 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 MSNP26038 577 aaKnown RBP17.19■□□□□ 0.34
NUP50-208ENST00000430547 CDKN1CP49918 316 aaPredicted RBP17.19■□□□□ 0.34
NUP50-208ENST00000430547 COL9A2Q14055 689 aaPredicted RBP17.19■□□□□ 0.34
NUP50-208ENST00000430547 CCDC38Q502W7 563 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 CYB5D1Q6P9G0 228 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 GSTA5Q7RTV2 222 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 PRSS42Q7Z5A4 293 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 WBP1Q96G27 269 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 INSM2Q96T92 566 aaPredicted RBP17.19■□□□□ 0.34
NUP50-208ENST00000430547 RAB33BQ9H082 229 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 APMAPQ9HDC9 416 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 EPHA6Q9UF33 1036 aa17.19■□□□□ 0.34
NUP50-208ENST00000430547 PCDHGA4Q9Y5G9 962 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms