RNA–Protein interactions for RNA: ENST00000429856.1

HMGB1P9-201, Transcript of high mobility group box 1 pseudogene 9, humanhuman

BASIC

Gene HMGB1P9, Length 646 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P9-201ENST00000429856 SNRNP70P08621 437 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 FAM58BPP0C7Q3 252 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 THEGLP0DJG4 465 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 G6PDP11413 515 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 FGF3P11487 239 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ERCC2P18074 760 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ACHEP22303 614 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 GPTP24298 496 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 PTPN3P26045 913 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 NMBRP28336 390 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 TCF7P36402 384 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 RPL3P39023 403 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 CD86P42081 329 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 MTHFRP42898 656 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 AMPHP49418 695 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 MXI1P50539 228 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 MRPS34P82930 218 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 TFAP4Q01664 338 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ACSM1Q08AH1 577 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 SREBF2Q12772 1141 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 PPIGQ13427 754 aaKnown RBP eCLIP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 PPA1Q15181 289 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 MEP1BQ16820 701 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 KRT24Q2M2I5 525 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 VWC2Q2TAL6 325 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 CBWD6Q4V339 395 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 FAM98BQ52LJ0 330 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 LBHQ53QV2 105 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 CBWD3Q5JTY5 395 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 NSUN5P2Q63ZY6 315 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF324BQ6AW86 544 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 NADSYN1Q6IA69 706 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 TYW3Q6IPR3 259 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 PAPD4Q6PIY7 484 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 CREB3L2Q70SY1 520 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ATG9AQ7Z3C6 839 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 SPATA19Q7Z5L4 167 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ARID3BQ8IVW6 561 aaPredicted RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 FAM219AQ8IW50 185 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 HACE1Q8IYU2 909 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 SIX6OS1Q8N1H7 587 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 ZNF619Q8N2I2 560 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 AADATQ8N5Z0 425 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 RBMXL3Q8N7X1 1067 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 IQUBQ8NA54 791 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 SLC4A11Q8NBS3 891 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 SPC24Q8NBT2 197 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 MCUQ8NE86 351 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 HMGCLL1Q8TB92 370 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 NUDCD2Q8WVJ2 157 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 RHBDF1Q96CC6 855 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 HDAC11Q96DB2 347 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 GRAMD2BQ96HH9 432 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 LRFN5Q96NI6 719 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 DACH2Q96NX9 599 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 NEK1Q96PY6 1258 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 PCGF1Q9BSM1 259 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 C1QTNF1Q9BXJ1 281 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 CACNG6Q9BXT2 260 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 RTN4RQ9BZR6 473 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 FZD8Q9H461 694 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 PPP1R3EQ9H7J1 279 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 EPB41L5Q9HCM4 733 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 HINT3Q9NQE9 182 aaKnown RBP2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 OR6C3Q9NZP0 311 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 TSPYL4Q9UJ04 414 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 KLHL20Q9Y2M5 609 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 NFS1Q9Y697 457 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 TTC3P53804 2025 aa2.91□□□□□ -1.94
HMGB1P9-201ENST00000429856 A0A0U1RQJ8 604 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 SMIM30A4D0T7 59 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 TMEM8BA6NDV4 472 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 C4orf47A7E2U8 309 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 CCDC188H7C350 402 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 J3KR12 359 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 SMAD9O15198 467 aaKnown RBP2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 NME6O75414 186 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GPC4O75487 556 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAGE7O76087 117 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 DDNO94850 711 aaPredicted RBP2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GCNT3O95395 438 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 VNN2O95498 520 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 CH25HO95992 272 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GBAP04062 536 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 HMOX1P09601 288 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAGE12FP0CL80 117 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAGE12GP0CL81 117 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAGE12IP0CL82 117 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 ACTN1P12814 892 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 TCF4P15884 667 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 PDGFRAP16234 1089 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 HSPA4P34932 840 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 BMXP51813 675 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 CAPZA1P52907 286 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 ART1P52961 327 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 DSCR9P59020 149 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAGE1Q13065 139 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 GAGE4Q13068 117 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 ITGADQ13349 1161 aa2.9□□□□□ -1.95
HMGB1P9-201ENST00000429856 ITGA7Q13683 1181 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms