RNA–Protein interactions for RNA: ENST00000427710.5

RTN4-210, Transcript of reticulon 4, humanhuman

TSL 4

Gene RTN4, Length 589 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-210ENST00000427710 CES3Q6UWW8 571 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 WASH2PQ6VEQ5 465 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 LRRC69Q6ZNQ3 347 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 ZNF534Q76KX8 674 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 CLDN19Q8N6F1 224 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 SPDYE1Q8NFV5 336 aaPredicted RBP14.57□□□□□ -0.08
RTN4-210ENST00000427710 OR4D9Q8NGE8 314 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 OR2L2Q8NH16 312 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 USP7Q93009 1102 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 PMEPA1Q969W9 287 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 RMDN2Q96LZ7 410 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 RANBP9Q96S59 729 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 INSM2Q96T92 566 aaPredicted RBP14.57□□□□□ -0.08
RTN4-210ENST00000427710 WASH6PQ9NQA3 447 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 CHRAC1Q9NRG0 131 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 HOMER3Q9NSC5 361 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 OCIAD1Q9NX40 245 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 SNX12Q9UMY4 172 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 LHX6Q9UPM6 363 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 NBEAQ8NFP9 2946 aa14.57□□□□□ -0.08
RTN4-210ENST00000427710 IGLV3-16A0A075B6K0 115 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 LILRA5A6NI73 299 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 CFAP99D6REC4 459 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 RRP8O43159 456 aaKnown RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 OR1I1O60431 355 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 PRAMEF10O60809 474 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 KCNJ13O60928 360 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 AMD1P17707 334 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 PSMA3P25788 255 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 HALP42357 657 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 PRLHRP49683 370 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 EIF3IQ13347 325 aaKnown RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 SQSTM1Q13501 440 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 SEMA3AQ14563 771 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 CCDC137Q6PK04 289 aaKnown RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 IGF2-ASQ6U949 168 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 NAPRTQ6XQN6 538 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 LDB1Q86U70 411 aaPredicted RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 SPACA3Q8IXA5 215 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 PPHLN1Q8NEY8 458 aaKnown RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 OR6P1Q8NGX9 317 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 RSC1A1Q92681 617 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 RNF31Q96EP0 1072 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 ZNF514Q96K75 400 aaPredicted RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 CAPZA3Q96KX2 299 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 C12orf66Q96MD2 445 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 CMKLR1Q99788 373 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 C19orf43Q9BQ61 176 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 SLC40A1Q9NP59 571 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 EIF2B3Q9NR50 452 aaKnown RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 IMP3Q9NV31 184 aaKnown RBP14.56□□□□□ -0.08
RTN4-210ENST00000427710 SYBUQ9NX95 663 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 FOXJ2Q9P0K8 574 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 ANKRD12Q6UB98 2062 aa14.56□□□□□ -0.08
RTN4-210ENST00000427710 ITPR1Q14643 2758 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 EFCAB7A8K855 629 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 PHF2O75151 1096 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 AVILO75366 819 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 UBXN7O94888 489 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 ITGA2BP08514 1039 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 FGF3P11487 239 aaPredicted RBP14.55□□□□□ -0.08
RTN4-210ENST00000427710 ITGB6P18564 788 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 NMBRP28336 390 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 ABCG1P45844 678 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 PREPP48147 710 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 LEPRP48357 1165 aaKnown RBP14.55□□□□□ -0.08
RTN4-210ENST00000427710 EPHA4P54764 986 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 GNG11P61952 73 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 PPP1CAP62136 330 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 KCNJ11Q14654 390 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 BRD3Q15059 726 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 CYP1B1Q16678 543 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 CLPPQ16740 277 aaPredicted RBP14.55□□□□□ -0.08
RTN4-210ENST00000427710 AFTPHQ6ULP2 937 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 C4orf22Q6V702 233 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 CLEC14AQ86T13 490 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 FAM129CQ86XR2 697 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 C17orf53Q8N3J3 647 aaPredicted RBP14.55□□□□□ -0.08
RTN4-210ENST00000427710 ZNF248Q8NDW4 579 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 HM13Q8TCT9 377 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 ACTRT1Q8TDG2 376 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 KCNE4Q8WWG9 221 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 LINC00615Q96LM1 132 aaPredicted RBP14.55□□□□□ -0.08
RTN4-210ENST00000427710 TGM7Q96PF1 710 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 NRTNQ99748 197 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 CCM2Q9BSQ5 444 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 POT1Q9NUX5 634 aa14.55□□□□□ -0.08
RTN4-210ENST00000427710 C9orf172C9J069 976 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 GOLGA8MH3BSY2 632 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 KLK10O43240 276 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 TMEM63AO94886 807 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 MTHFD1P11586 935 aaKnown RBP14.54□□□□□ -0.08
RTN4-210ENST00000427710 TPSB2P20231 275 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 PDHA2P29803 388 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 CSTF2P33240 577 aaKnown RBP eCLIP14.54□□□□□ -0.08
RTN4-210ENST00000427710 PRAMEP78395 509 aa14.54□□□□□ -0.08
RTN4-210ENST00000427710 SRSF6Q13247 344 aaKnown RBP14.54□□□□□ -0.08
RTN4-210ENST00000427710 TRA2AQ13595 282 aaKnown RBP eCLIP14.54□□□□□ -0.08
RTN4-210ENST00000427710 TGIF1Q15583 401 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms