RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 ZNF558Q96NG5 402 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 HIST1H2AAQ96QV6 131 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 SPAG5Q96R06 1193 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 AGPAT1Q99943 283 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CLSTN3Q9BQT9 956 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 HERC2P3Q9BVR0 1158 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 UBXN6Q9BZV1 441 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 NUAK2Q9H093 628 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 ZBP1Q9H171 429 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 DPEP3Q9H4B8 488 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TLE6Q9H808 572 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 NHEJ1Q9H9Q4 299 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TMLHEQ9NVH6 421 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 SPG21Q9NZD8 308 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 IL37Q9NZH6 218 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 FNIP2Q9P278 1114 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 DNAJB11Q9UBS4 358 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 STK39Q9UEW8 545 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CDH22Q9UJ99 828 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 MID2Q9UJV3 735 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 CDH9Q9ULB4 789 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 PRG3Q9Y2Y8 225 aaPredicted RBP5.63□□□□□ -1.51
C9orf3-205ENST00000427193 VWA8A3KMH1 1905 aa5.63□□□□□ -1.51
C9orf3-205ENST00000427193 TDRD15B5MCY1 1934 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ARHGEF37A1IGU5 675 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 OR6C75A6NL08 312 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 BTNL10A8MVZ5 291 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ADAM12O43184 909 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 SMAD6O43541 496 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ATP2C2O75185 946 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 USP12O75317 370 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 TADA2AO75478 443 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 FGF18O76093 207 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 MTA2O94776 668 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 CCDC172P0C7W6 258 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 CD58P19256 250 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 MMP8P22894 467 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 MAGEA11P43364 429 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 HADHBP55084 474 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 RPS16P62249 146 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 B4GALNT1Q00973 533 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 YWHAHQ04917 246 aaPredicted RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 RNASELQ05823 741 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 KLHL30Q0D2K2 578 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 KPNB1Q14974 876 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 PTPN14Q15678 1187 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ASIC2Q16515 512 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 USP41Q3LFD5 358 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF528Q3MIS6 628 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 RAB41Q5JT25 222 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 FAM171A1Q5VUB5 890 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 SCARA5Q6ZMJ2 495 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF793Q6ZN11 406 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 TOGARAM2Q6ZUX3 1019 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 MON1BQ7L1V2 547 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ACOT1Q86TX2 421 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 MAML2Q8IZL2 1156 aaPredicted RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 SCML4Q8N228 414 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ANKRD52Q8NB46 1076 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 BCAS4Q8TDM0 211 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 WIPF2Q8TF74 440 aaPredicted RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ANP32BQ92688 251 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ZDHHC12Q96GR4 267 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 PCED1BQ96HM7 432 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 TNIP3Q96KP6 325 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 B3GALT6Q96L58 329 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 ZNF830Q96NB3 372 aaPredicted RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 SYT15Q9BQS2 421 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 CINPQ9BW66 212 aaPredicted RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 CHST8Q9H2A9 424 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 HIPK2Q9H2X6 1198 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 POMKQ9H5K3 350 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 PNPLA8Q9NP80 782 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 SEMA4BQ9NPR2 832 aaPredicted RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 DDX43Q9NXZ2 648 aaKnown RBP5.62□□□□□ -1.51
C9orf3-205ENST00000427193 TAS2R14Q9NYV8 317 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 DLGAP2Q9P1A6 1054 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 SEMA5BQ9P283 1151 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 PYCARDQ9ULZ3 195 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 FREM2Q5SZK8 3169 aa5.62□□□□□ -1.51
C9orf3-205ENST00000427193 A0A0U1RQJ8 604 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 TMEM8BA6NDV4 472 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 A8MXQ7 604 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 TAF4O00268 1085 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 TULP2O00295 520 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 BEST1O76090 585 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 PLAUP00749 431 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 TPM1P09493 284 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 SETSIPP0DME0 302 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 KRT5P13647 590 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 ACAT1P24752 427 aaKnown RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 RBL1P28749 1068 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 DEKP35659 375 aaKnown RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 ROR1Q01973 937 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 GFPT1Q06210 699 aaPredicted RBP5.61□□□□□ -1.51
C9orf3-205ENST00000427193 CCDC15Q0P6D6 951 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 SMARCB1Q12824 385 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 PTPN20Q4JDL3 420 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 C10orf76Q5T2E6 689 aa5.61□□□□□ -1.51
C9orf3-205ENST00000427193 PLEKHA7Q6IQ23 1121 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms