RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 BRAFP15056 766 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NR2C2P49116 596 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 VAV2P52735 878 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DMPKQ09013 629 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NR1I3Q14994 352 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NADK2Q4G0N4 442 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TEX44Q53QW1 395 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LYPLAL1Q5VWZ2 237 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GPR135Q8IZ08 494 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IQCKQ8N0W5 287 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HEXDCQ8WVB3 486 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FAF2Q96CS3 445 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RNF31Q96EP0 1072 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DCUN1D1Q96GG9 259 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C12orf66Q96MD2 445 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NLNQ9BYT8 704 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RUBCNLQ9H714 662 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GLOD4Q9HC38 313 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C1GALT1Q9NS00 363 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DDX56Q9NY93 547 aaKnown RBP11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PSMD13Q9UNM6 376 aa11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZFC3H1O60293 1989 aaKnown RBP11.99□□□□□ -0.49
HLA-DQB3-203ENST00000425319 A0A087X0T9 212 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 OR6C74A6NCV1 312 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MGAT4DA6NG13 374 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 A6NL46 340 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C2orf81A6NN90 581 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CFAP99D6REC4 459 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 STX7O15400 261 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TPM1P09493 284 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FAM228BP0C875 321 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MTHFD1P11586 935 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ARHGAP25P42331 645 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 UQCRFS1P47985 274 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 UBASH3AP57075 661 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC10A2Q12908 348 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TFDP2Q14188 446 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MESDQ14696 234 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KCNAB1Q14722 419 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NAA30Q147X3 362 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KYNUQ16719 465 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 EIF2S3LQ2VIR3 472 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ATP13A5Q4VNC0 1218 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PAPD7Q5XG87 772 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 JMJD6Q6NYC1 403 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PID1Q7Z2X4 250 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MAMDC2Q7Z304 686 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CNTD1Q8N815 330 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CLEC1AQ8NC01 280 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNF398Q8TD17 642 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TFB1MQ8WVM0 346 aaKnown RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PNPLA2Q96AD5 504 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 C5orf34Q96MH7 638 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NAP1L5Q96NT1 182 aaPredicted RBP11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TRIB3Q96RU7 358 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 VAT1Q99536 393 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 DHRS4Q9BTZ2 278 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TRIM55Q9BYV6 548 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MLXIPLQ9NP71 852 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CAPN11Q9UMQ6 739 aa11.98□□□□□ -0.49
HLA-DQB3-203ENST00000425319 NAV2Q8IVL1 2488 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IFRD1O00458 451 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 KDM1AO60341 852 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PBLDP30039 288 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HADHAP40939 763 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PREPP48147 710 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 RPS18P62269 152 aaKnown RBP11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZBTB17Q13105 803 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CHAF1BQ13112 559 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IHHQ14623 411 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FNBP1LQ5T0N5 605 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 IRAK1BP1Q5VVH5 260 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 METRNLQ641Q3 311 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GLT6D1Q7Z4J2 308 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZNF547Q8IVP9 402 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ZADH2Q8N4Q0 377 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PQLC3Q8N755 202 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 LRRN4Q8WUT4 740 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 EID2BQ96D98 161 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 VPS50Q96JG6 964 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 FSD1LQ9BXM9 530 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MFRPQ9BY79 579 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 CHST8Q9H2A9 424 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HSD3B7Q9H2F3 369 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SRMSQ9H3Y6 488 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 ACTR5Q9H9F9 607 aaPredicted RBP11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 VPS37BQ9H9H4 285 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 AGPAT4Q9NRZ5 378 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TCFL5Q9UL49 500 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC5A6Q9Y289 635 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 WDR37Q9Y2I8 494 aa11.97□□□□□ -0.49
HLA-DQB3-203ENST00000425319 A1L4Q6 167 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 GSAPA4D1B5 854 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 OR2AG2A6NM03 316 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 E7EQ34 232 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 TIAF1O95411 115 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 MT-CYBP00156 380 aaPredicted RBP11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 HLA-DPA1P20036 260 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 SLC1A1P43005 524 aa11.96□□□□□ -0.49
HLA-DQB3-203ENST00000425319 PTGIRP43119 386 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms