RNA–Protein interactions for RNA: ENST00000422544.2

PDGFC-202, Transcript of platelet derived growth factor C, humanhuman

TSL 5 BASIC

Gene PDGFC, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-202ENST00000422544 TDRD6O60522 2096 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 UBA6A0AVT1 1052 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 MGAT4DA6NG13 374 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 B4DGG1 531 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PRMT5O14744 637 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PFDN6O15212 129 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 KCNJ13O60928 360 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PIAS1O75925 651 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 HAUS5O94927 633 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 OR56A5P0C7T3 313 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 VCLP18206 1134 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 OGNP20774 298 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 CSRP1P21291 193 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 SDHBP21912 280 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 RPL10P27635 214 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PRLHRP49683 370 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 EIF3BP55884 814 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 GPX6P59796 221 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 SHC2P98077 582 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 FRG1Q14331 258 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 NFE2L1Q14494 772 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 SEPT7Q16181 437 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PROX2Q3B8N5 592 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 TEDDM1Q5T9Z0 273 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 RNF187Q5TA31 235 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PTRHD1Q6GMV3 140 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 ZCCHC8Q6NZY4 707 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 OGFOD3Q6PK18 319 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 LMNTD2Q8IXW0 634 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 CFAP206Q8IYR0 622 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 LILRA3Q8N6C8 439 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 FAM181AQ8N9Y4 354 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 OR2L2Q8NH16 312 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 GSDMBQ8TAX9 411 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 ZDHHC1Q8WTX9 485 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PATE1Q8WXA2 126 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 LPGAT1Q92604 370 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 CNDP2Q96KP4 475 aaKnown RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 LINC00615Q96LM1 132 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 APOLD1Q96LR9 279 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 CDC6Q99741 560 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 CCM2Q9BSQ5 444 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PHACTR1Q9C0D0 580 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 P2RY12Q9H244 342 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 SLC32A1Q9H598 525 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 OCEL1Q9H607 264 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 ANKZF1Q9H8Y5 726 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 LRRC4CQ9HCJ2 640 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 FTSJ1Q9UET6 329 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 V9GYY5 206 aaPredicted RBP9.11□□□□□ -0.95
PDGFC-202ENST00000422544 NAV2Q8IVL1 2488 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 TMEM131Q92545 1883 aa9.11□□□□□ -0.95
PDGFC-202ENST00000422544 PLXNB3Q9ULL4 1909 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 LY6G6EA0A0G2JKS1 128 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 C17orf113A0A1B0GUU1 675 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 SPAARA0A1B0GVQ0 90 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 TCRBV9S1A1TA0A576 114 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 PRR19A6NJB7 356 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 PDZK1P1A8MUH7 402 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 QSOX1O00391 747 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 GIPC1O14908 333 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 NOBOXO60393 691 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 TRIM16O95361 564 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 AHSGP02765 367 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 GSTA2P09210 222 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 FAM153BP0C7A2 387 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 IDSP22304 550 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 RPS3P23396 243 aaKnown RBP eCLIP9.1□□□□□ -0.95
PDGFC-202ENST00000422544 GABRB3P28472 473 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 CLCNKAP51800 687 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 MAZP56270 477 aaKnown RBP9.1□□□□□ -0.95
PDGFC-202ENST00000422544 TUBB4BP68371 445 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 DAB2P98082 770 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 DMPKQ09013 629 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 MGAT5Q09328 741 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 DNAJC3Q13217 504 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 BRD3Q15059 726 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 NR0B2Q15466 257 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 TRIP6Q15654 476 aaKnown RBP9.1□□□□□ -0.95
PDGFC-202ENST00000422544 KYNUQ16719 465 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 FAM153CQ494X1 144 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 CTSL3PQ5NE16 218 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 UBAP2Q5T6F2 1119 aaKnown RBP9.1□□□□□ -0.95
PDGFC-202ENST00000422544 METRNLQ641Q3 311 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 IYDQ6PHW0 289 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 CNSTQ6PJW8 725 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 XKR5Q6UX68 686 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 NAPRTQ6XQN6 538 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 CEP128Q6ZU80 1094 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 LRRC6Q86X45 466 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 RELL1Q8IUW5 271 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 CNTN4Q8IWV2 1026 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 SLC35F3Q8IY50 421 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 GSPT2Q8IYD1 628 aaKnown RBP9.1□□□□□ -0.95
PDGFC-202ENST00000422544 NAGSQ8N159 534 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 KRT222Q8N1A0 295 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 ARL10Q8N8L6 244 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 KYQ8NBH2 561 aa9.1□□□□□ -0.95
PDGFC-202ENST00000422544 C2CD4AQ8NCU7 369 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms