RNA–Protein interactions for RNA: ENST00000419629.1

SDCBPP3-201, Transcript of syndecan binding protein pseudogene 3, humanhuman

BASIC

Gene SDCBPP3, Length 891 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBPP3-201ENST00000419629 ZC3HAV1LQ96H79 300 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZIM3Q96PE6 472 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PLEKHF1Q96S99 279 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SIKE1Q9BRV8 207 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 DESI2Q9BSY9 194 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 OSBPL10Q9BXB5 764 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SPATA16Q9BXB7 569 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NPFFR1Q9GZQ6 430 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 DRC3Q9H069 523 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 LMAN2LQ9H0V9 348 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SLC32A1Q9H598 525 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 SYNCQ9H7C4 482 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 MVB12BQ9H7P6 319 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TMBIM4Q9HC24 238 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 KCNMB3Q9NPA1 279 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PPANQ9NQ55 473 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM114A2Q9NRY5 505 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 PTTG2Q9NZH5 202 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 DLGAP2Q9P1A6 1054 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TUBE1Q9UJT0 475 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 FBXO9Q9UK97 447 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 TTC7AQ9ULT0 858 aaPredicted RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 RAI2Q9Y5P3 530 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 FADS3Q9Y5Q0 445 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 NOTCH3Q9UM47 2321 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ATP10BO94823 1461 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZC3H13Q5T200 1668 aaKnown RBP3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 MAP3K15Q6ZN16 1313 aa3.39□□□□□ -1.87
SDCBPP3-201ENST00000419629 ARHGEF10O15013 1369 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PNPLA6Q8IY17 1366 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CDC42BPGQ6DT37 1551 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ANKARQ7Z5J8 1434 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 MYO3AQ8NEV4 1616 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 IGHV4-28A0A0C4DH34 117 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 A0A1B0GVM2 712 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 TEX22C9J3V5 150 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 GOLGA8TH3BQL2 631 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 NVLO15381 856 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 HNRNPCL1O60812 293 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ATP2C2O75185 946 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 TACC1O75410 805 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SOX30O94993 753 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 GOLGA8HP0CJ92 632 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ATP1A3P13637 1013 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 GNAZP19086 355 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CD58P19256 250 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 EIF2S2P20042 333 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CMA1P23946 247 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CNTFP26441 200 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 TTKP33981 857 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 THPOP40225 353 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 VHLP40337 213 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 RGS2P41220 211 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PEX5P50542 639 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCR5P51681 352 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 RAD23BP54727 409 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CSE1LP55060 971 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CDH15P55291 814 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 EIF3BP55884 814 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 GEMIN4P57678 1058 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 NCALDP61601 193 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ADORA2A-AS1P86434 159 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SPAG1Q07617 926 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PPIDQ08752 370 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ITGADQ13349 1161 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ITGA7Q13683 1181 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CAPSQ13938 189 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 VEPH1Q14D04 833 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 RRS1Q15050 365 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 STK38Q15208 465 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SHBQ15464 509 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 BCL2A1Q16548 175 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 PARP6Q2NL67 630 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 ZNF284Q2VY69 593 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 TWISTNBQ3B726 338 aaPredicted RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CNPY1Q3B7I2 92 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 FBXO43Q4G163 708 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 HSP90AA5PQ58FG0 334 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SPDYCQ5MJ68 293 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SERTAD4-AS1Q5TG53 156 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CES5AQ6NT32 575 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 C8orf74Q6P047 294 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM173BQ6P4H8 233 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 C17orf99Q6UX52 265 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 C3orf62Q6ZUJ4 267 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 FAM160B2Q86V87 743 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 EXOC3L1Q86VI1 746 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 MON1AQ86VX9 555 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SFTPA2Q8IWL1 248 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 MB21D2Q8IYB1 491 aaPredicted RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCDC105Q8IYK2 499 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 IQCKQ8N0W5 287 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SKA1Q96BD8 255 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCDC43Q96MW1 224 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 NEK1Q96PY6 1258 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 YME1L1Q96TA2 773 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 HNRNPABQ99729 332 aaKnown RBP3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 CCT7Q99832 543 aa3.38□□□□□ -1.87
SDCBPP3-201ENST00000419629 SYT15Q9BQS2 421 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms