RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 DNAJC15Q9Y5T4 150 aa16.53■□□□□ 0.24
SSBP3-205ENST00000417664 MYO9BQ13459 2157 aa16.52■□□□□ 0.24
SSBP3-205ENST00000417664 LRRC14BA6NHZ5 514 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 SLC16A5O15375 505 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 GPC4O75487 556 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 ATP6V1G2O95670 118 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 C8GP07360 202 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 UROSP10746 265 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 TSPAN8P19075 237 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 PIK3R1P27986 724 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 CCR7P32248 378 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 IL12RB1P42701 662 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 CPA2P48052 419 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 ATP4BP51164 291 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 MXRA7P84157 204 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 CDKL1Q00532 357 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 SP140Q13342 867 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 ENPP2Q13822 863 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 SNCBQ16143 134 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 TMEM52BQ4KMG9 183 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 CLEC6AQ6EIG7 209 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 LARP4Q71RC2 724 aaKnown RBP eCLIP16.52■□□□□ 0.23
SSBP3-205ENST00000417664 ERN2Q76MJ5 926 aaKnown RBP16.52■□□□□ 0.23
SSBP3-205ENST00000417664 PACS2Q86VP3 889 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 FAM13CQ8NE31 585 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 UBTD2Q8WUN7 234 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 FGF14Q92915 247 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 NECTIN4Q96NY8 510 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 EPHX3Q9H6B9 360 aa16.52■□□□□ 0.23
SSBP3-205ENST00000417664 SEMA4BQ9NPR2 832 aaPredicted RBP16.52■□□□□ 0.23
SSBP3-205ENST00000417664 RANBP2P49792 3224 aaKnown RBP16.51■□□□□ 0.23
SSBP3-205ENST00000417664 ARNTLO00327 626 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 UBDO15205 165 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 CRCPO75575 148 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 HNRNPH1P31943 449 aaKnown RBP16.51■□□□□ 0.23
SSBP3-205ENST00000417664 CPOXP36551 454 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 PGM1P36871 562 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 TNFRSF4P43489 277 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 AGTR2P50052 363 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 RAP1GDS1P52306 607 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 DPTQ07507 201 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 SQLEQ14534 574 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 POM121L1PQ3SYA9 428 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 PHYKPLQ8IUZ5 450 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 TWIST2Q8WVJ9 160 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 ASZ1Q8WWH4 475 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 LENG8Q96PV6 779 aaPredicted RBP16.51■□□□□ 0.23
SSBP3-205ENST00000417664 TRIM54Q9BYV2 358 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 PRSS16Q9NQE7 514 aa16.51■□□□□ 0.23
SSBP3-205ENST00000417664 UTP6Q9NYH9 597 aaKnown RBP16.51■□□□□ 0.23
SSBP3-205ENST00000417664 FADS2P1A8MWK0 482 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 SPINT1O43278 529 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 TM7SF2O76062 418 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 EPHX1P07099 455 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 GM2AP17900 193 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 MAPK9P45984 424 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 PIK3CGP48736 1102 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 CYLC2Q14093 348 aaPredicted RBP16.5■□□□□ 0.23
SSBP3-205ENST00000417664 MAPRE2Q15555 327 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 GPRIN3Q6ZVF9 776 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 TCAIMQ8N3R3 496 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 MAGEC3Q8TD91 643 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 CATSPER2Q96P56 530 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 SLC12A9Q9BXP2 914 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 ZCCHC2Q9C0B9 1178 aaKnown RBP16.5■□□□□ 0.23
SSBP3-205ENST00000417664 NDE1Q9NXR1 346 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 EPS15L1Q9UBC2 864 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 BAIAP2L1Q9UHR4 511 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 EIF2B4Q9UI10 523 aaKnown RBP16.5■□□□□ 0.23
SSBP3-205ENST00000417664 COPG1Q9Y678 874 aaKnown RBP16.5■□□□□ 0.23
SSBP3-205ENST00000417664 TCF20Q9UGU0 1960 aaKnown RBP16.5■□□□□ 0.23
SSBP3-205ENST00000417664 PPP6CO00743 305 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 TBX10O75333 385 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 OTCP00480 354 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 ANXA5P08758 320 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 RBBP7Q16576 425 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 RHBDF1Q96CC6 855 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 CHFRQ96EP1 664 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 EGFL8Q99944 293 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 ZNF576Q9H609 170 aa16.5■□□□□ 0.23
SSBP3-205ENST00000417664 DENND4AQ7Z401 1863 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 PABPN1LA6NDY0 278 aaKnown RBP16.49■□□□□ 0.23
SSBP3-205ENST00000417664 RNASEH1O60930 286 aaKnown RBP16.49■□□□□ 0.23
SSBP3-205ENST00000417664 ATG13O75143 517 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 SLCO2B1O94956 709 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 GSTM1P09488 218 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 PRLHRP49683 370 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 HNMTP50135 292 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 GSTM4Q03013 218 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 HSPA14Q0VDF9 509 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 GTF2H2Q13888 395 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 EGFLAMQ63HQ2 1017 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 TMEM198Q66K66 360 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 GTF2H2CQ6P1K8 395 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 SYVN1Q86TM6 617 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 MMAAQ8IVH4 418 aaKnown RBP16.49■□□□□ 0.23
SSBP3-205ENST00000417664 SFTPA1Q8IWL2 248 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 POU5F2Q8N7G0 328 aa16.49■□□□□ 0.23
SSBP3-205ENST00000417664 ST13P5Q8NFI4 369 aaPredicted RBP16.49■□□□□ 0.23
SSBP3-205ENST00000417664 ASB11Q8WXH4 323 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms