RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 C21orf140B9A014 251 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 GAPDHSO14556 408 aaPredicted RBP14.11□□□□□ -0.15
PAF1-202ENST00000416728 STX7O15400 261 aaKnown RBP14.11□□□□□ -0.15
PAF1-202ENST00000416728 RFPL1O75677 317 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 TIAF1O95411 115 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 PRAMEF1O95521 474 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 MTHFD1P11586 935 aaKnown RBP14.11□□□□□ -0.15
PAF1-202ENST00000416728 FOLR1P15328 257 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 MSH3P20585 1137 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 CA5AP35218 305 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 FNBP1LQ5T0N5 605 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 METRNLQ641Q3 311 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 PWWP2BQ6NUJ5 590 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 TCTN3Q6NUS6 607 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 BPHLQ86WA6 291 aaPredicted RBP14.11□□□□□ -0.15
PAF1-202ENST00000416728 KMT5CQ86Y97 462 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 KATNAL2Q8IYT4 538 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 RCOR2Q8IZ40 523 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 ZNF398Q8TD17 642 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 MAP3K3Q99759 626 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 GOLPH3Q9H4A6 298 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 FGF21Q9NSA1 209 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 TRHDEQ9UKU6 1024 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 MAN2B2Q9Y2E5 1009 aa14.11□□□□□ -0.15
PAF1-202ENST00000416728 CFAP20Q9Y6A4 193 aaKnown RBP14.11□□□□□ -0.15
PAF1-202ENST00000416728 UBR5O95071 2799 aaPredicted RBP14.11□□□□□ -0.15
PAF1-202ENST00000416728 OR5K3A6NET4 321 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 TLCD2A6NGC4 264 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 RECKO95980 971 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 EBLN1P0CF75 366 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 NR1D1P20393 614 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 PMS2P54278 862 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 HADHBP55084 474 aaKnown RBP14.1□□□□□ -0.15
PAF1-202ENST00000416728 UBAP2LQ14157 1087 aaKnown RBP14.1□□□□□ -0.15
PAF1-202ENST00000416728 DET1Q7L5Y6 550 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 TMEM135Q86UB9 458 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 OOSP2Q86WS3 158 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 BEND7Q8N7W2 519 aaPredicted RBP14.1□□□□□ -0.15
PAF1-202ENST00000416728 TEX19Q8NA77 164 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 SEC14L1Q92503 715 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 RBM41Q96IZ5 413 aaKnown RBP14.1□□□□□ -0.15
PAF1-202ENST00000416728 WWP1Q9H0M0 922 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 GBA3Q9H227 469 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 ACTL8Q9H568 366 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 HRASLS2Q9NWW9 162 aa14.1□□□□□ -0.15
PAF1-202ENST00000416728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.1□□□□□ -0.15
PAF1-202ENST00000416728 KLHL33A6NCF5 533 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 MGAT4DA6NG13 374 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 C2orf81A6NN90 581 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 AKR1B15C9JRZ8 316 aaPredicted RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 K7EM74 188 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ANXA9O76027 345 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 AGTP01019 485 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 NTRK1P04629 796 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 SLC35G4P0C7Q5 338 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 LPOP22079 712 aaPredicted RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 MAGEA1P43355 309 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 MARCKSL1P49006 195 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 GEMP55040 296 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 HSD11B2P80365 405 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 PDE1BQ01064 536 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 SRSF1Q07955 248 aaKnown RBP eCLIP14.09□□□□□ -0.15
PAF1-202ENST00000416728 PTPRCAPQ14761 206 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 CCDC181Q5TID7 509 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ARMC6Q6NXE6 501 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 DUS1LQ6P1R4 473 aaKnown RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 ASB18Q6ZVZ8 466 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 BBS12Q6ZW61 710 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ZFPM2Q8WW38 1151 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 C12orf66Q96MD2 445 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 INSM2Q96T92 566 aaPredicted RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 FERMT1Q9BQL6 677 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 FICDQ9BVA6 458 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ANKMY1Q9P2S6 941 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 FAM8A1Q9UBU6 413 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 TLK1Q9UKI8 766 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ACSL5Q9ULC5 683 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 PLAAQ9Y263 795 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ARL5AQ9Y689 179 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 MAST4O15021 2626 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 H7C0C1 242 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 APOC4-APOC2K7ER74 178 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 CPNE3O75131 537 aaKnown RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 SRP72O76094 671 aaKnown RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 APOC2P02655 101 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 RBL1P28749 1068 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 ATP5OP48047 213 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 RPS15P62841 145 aaKnown RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 TUBB4BP68371 445 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 TUBB2AQ13885 445 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 GSE1Q14687 1217 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 TAF1AQ15573 450 aaPredicted RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 ITPRIPL1Q6GPH6 555 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 CERS6Q6ZMG9 384 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 APLFQ8IW19 511 aaPredicted RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 D2HGDHQ8N465 521 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 SPDYE1Q8NFV5 336 aaPredicted RBP14.09□□□□□ -0.15
PAF1-202ENST00000416728 OR4K2Q8NGD2 314 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 OR2L2Q8NH16 312 aa14.09□□□□□ -0.15
PAF1-202ENST00000416728 TUBB2BQ9BVA1 445 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms