RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 GLIS1Q8NBF1 620 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 DDHD1Q8NEL9 900 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF398Q8TD17 642 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 NANOS1Q8WY41 292 aaKnown RBP9.44□□□□□ -0.9
LINC01090-201ENST00000415357 GTPBP3Q969Y2 492 aaKnown RBP9.44□□□□□ -0.9
LINC01090-201ENST00000415357 RTP4Q96DX8 246 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 DNAJC1Q96KC8 554 aaKnown RBP9.44□□□□□ -0.9
LINC01090-201ENST00000415357 CCDC74BQ96LY2 380 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 TTC25Q96NG3 672 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 SLC46A1Q96NT5 459 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 PPP1R2P1Q96PQ5 205 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 SLC38A3Q99624 504 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 TBC1D10AQ9BXI6 508 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 TLR10Q9BXR5 811 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 ASB8Q9H765 288 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 LRRC40Q9H9A6 602 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 SARS2Q9NP81 518 aaKnown RBP9.44□□□□□ -0.9
LINC01090-201ENST00000415357 THSD1Q9NS62 852 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 SMOXQ9NWM0 555 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 ZDHHC3Q9NYG2 299 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 CPNE7Q9UBL6 633 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 FAM8A1Q9UBU6 413 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF148Q9UQR1 794 aa9.44□□□□□ -0.9
LINC01090-201ENST00000415357 UNC13CQ8NB66 2214 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 KIR2DS5A0A0G2JLQ3 304 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 A0A0G2JNG1 304 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 OR52A4PA6NMU1 304 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 CDRT15L2A8MXV6 281 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 KIR2DS3K7RE56 304 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 PPFIA2O75334 1257 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 POP7O75817 140 aaKnown RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF189O75820 626 aaPredicted RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 CRTAMO95727 393 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 AP2A1O95782 977 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 THBS1P07996 1170 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 ITGA2BP08514 1039 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 JMJD7P0C870 316 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 ZSCAN5DPP0CG00 497 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 MSH3P20585 1137 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 MC4RP32245 332 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 GMPRP36959 345 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 GRIA1P42261 906 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 CDKN1CP49918 316 aaPredicted RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 MAPK10P53779 464 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 UBE2IP63279 158 aaKnown RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 EIF3IQ13347 325 aaKnown RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 KIR2DS5Q14953 304 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 P3H1Q32P28 736 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 CCDC38Q502W7 563 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 SNAP47Q5SQN1 464 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 FNBP1LQ5T0N5 605 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 TMEM220Q6QAJ8 160 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 IGF2-ASQ6U949 168 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 SLC9B2Q86UD5 537 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 PDZD3Q86UT5 571 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF248Q8NDW4 579 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 TRIM58Q8NG06 486 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 OR52K1Q8NGK4 314 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 DTX3LQ8TDB6 740 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 AHCYL2Q96HN2 611 aaKnown RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 STN1Q9H668 368 aaKnown RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 ARNT2Q9HBZ2 717 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 ZNF624Q9P2J8 865 aaPredicted RBP9.43□□□□□ -0.9
LINC01090-201ENST00000415357 WDR37Q9Y2I8 494 aa9.43□□□□□ -0.9
LINC01090-201ENST00000415357 GOLGA6L3A6NEY3 463 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 TMX2-CTNND1H3BSU7 103 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 KLK10O43240 276 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 SGTAO43765 313 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 DUX1O43812 170 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 NRDCO43847 1150 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CEP104O60308 925 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 VIPP01282 170 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 FGGP02679 453 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 THRAP10827 490 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CCL4P13236 92 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 SLC2A4P14672 509 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 IDSP22304 550 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 SLC5A2P31639 672 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 KCNJ1P48048 391 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 LIMK2P53671 638 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 GPLD1P80108 840 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 TLE3Q04726 772 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 NFE2L1Q14494 772 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CLCA4Q14CN2 919 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CLEC14AQ86T13 490 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 AMZ2Q86W34 360 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 TRIM48Q8IWZ4 208 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 OR4D9Q8NGE8 314 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 GPR150Q8NGU9 434 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 OR10G6Q8NH81 332 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 KCNE4Q8WWG9 221 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 JPH3Q8WXH2 748 aaPredicted RBP9.42□□□□□ -0.9
LINC01090-201ENST00000415357 NCSTNQ92542 709 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 PMEPA1Q969W9 287 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 LRRC45Q96CN5 670 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 SGF29Q96ES7 293 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 CMKLR1Q99788 373 aa9.42□□□□□ -0.9
LINC01090-201ENST00000415357 FRMD8P1Q9BZ68 369 aaPredicted RBP9.42□□□□□ -0.9
LINC01090-201ENST00000415357 ZCCHC2Q9C0B9 1178 aaKnown RBP9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms