RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 APOL2Q9BQE5 337 aa18.8■□□□□ 0.6
CPSF7-204ENST00000413232 FICDQ9BVA6 458 aa18.8■□□□□ 0.6
CPSF7-204ENST00000413232 PKP3Q9Y446 797 aa18.8■□□□□ 0.6
CPSF7-204ENST00000413232 KCNMB2Q9Y691 235 aa18.8■□□□□ 0.6
CPSF7-204ENST00000413232 MAST4O15021 2626 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 HACD1B0YJ81 288 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 KCNJ13O60928 360 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 NR1D1P20393 614 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 ADRA1AP35348 466 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 ERV3-1Q14264 604 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 RANBP10Q6VN20 620 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 LILRA3Q8N6C8 439 aaPredicted RBP18.79■□□□□ 0.6
CPSF7-204ENST00000413232 OR4K2Q8NGD2 314 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 SLC41A2Q96JW4 573 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 RUFY1Q96T51 708 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 FAM118BQ9BPY3 351 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 GBA3Q9H227 469 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 SMOXQ9NWM0 555 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.79■□□□□ 0.6
CPSF7-204ENST00000413232 LNPEPQ9UIQ6 1025 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 TRHDEQ9UKU6 1024 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 DNMT3AQ9Y6K1 912 aaPredicted RBP18.79■□□□□ 0.6
CPSF7-204ENST00000413232 CCDC88CQ9P219 2028 aa18.79■□□□□ 0.6
CPSF7-204ENST00000413232 H7C0C1 242 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 APOC4-APOC2K7ER74 178 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 STX7O15400 261 aaKnown RBP18.78■□□□□ 0.6
CPSF7-204ENST00000413232 KATNA1O75449 491 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 PRAMEF1O95521 474 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 APOC2P02655 101 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 MTHFD1P11586 935 aaKnown RBP18.78■□□□□ 0.6
CPSF7-204ENST00000413232 ATP5OP48047 213 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 XIAPP98170 497 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 MC1RQ01726 317 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 XRCC4Q13426 336 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 ITGA9Q13797 1035 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 IGFBP7Q16270 282 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 LARP7Q4G0J3 582 aaKnown RBP eCLIP18.78■□□□□ 0.6
CPSF7-204ENST00000413232 PWWP2BQ6NUJ5 590 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 C11orf63Q6NUN7 778 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 AADACL2Q6P093 401 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 PPP1R3BQ86XI6 285 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 ACTL9Q8TC94 416 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 STAMBPL1Q96FJ0 436 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 PPM1MQ96MI6 270 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 FSD1LQ9BXM9 530 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 ZCCHC2Q9C0B9 1178 aaKnown RBP18.78■□□□□ 0.6
CPSF7-204ENST00000413232 WWP1Q9H0M0 922 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 IMP3Q9NV31 184 aaKnown RBP18.78■□□□□ 0.6
CPSF7-204ENST00000413232 FAM8A1Q9UBU6 413 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 FKBPLQ9UIM3 349 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 DUSP10Q9Y6W6 482 aa18.78■□□□□ 0.6
CPSF7-204ENST00000413232 EBLN1P0CF75 366 aa18.77■□□□□ 0.6
CPSF7-204ENST00000413232 LPOP22079 712 aaPredicted RBP18.77■□□□□ 0.6
CPSF7-204ENST00000413232 PSMB4P28070 264 aa18.77■□□□□ 0.6
CPSF7-204ENST00000413232 TNNT3P45378 269 aaPredicted RBP18.77■□□□□ 0.6
CPSF7-204ENST00000413232 OTUD4Q01804 1114 aaKnown RBP18.77■□□□□ 0.6
CPSF7-204ENST00000413232 OR13C4Q8NGS5 318 aa18.77■□□□□ 0.6
CPSF7-204ENST00000413232 CT55Q8WUE5 264 aa18.77■□□□□ 0.6
CPSF7-204ENST00000413232 RBM41Q96IZ5 413 aaKnown RBP18.77■□□□□ 0.6
CPSF7-204ENST00000413232 ANP32EQ9BTT0 268 aa18.77■□□□□ 0.6
CPSF7-204ENST00000413232 LHX9Q9NQ69 397 aa18.77■□□□□ 0.6
CPSF7-204ENST00000413232 SNRNP200O75643 2136 aaKnown RBP18.77■□□□□ 0.6
CPSF7-204ENST00000413232 MGAT4DA6NG13 374 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 SRP72O76094 671 aaKnown RBP18.76■□□□□ 0.59
CPSF7-204ENST00000413232 NTRK1P04629 796 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 MSH3P20585 1137 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 AKT1P31749 480 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 CASRP41180 1078 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 GEMP55040 296 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 TUBB3Q13509 450 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 TAF1AQ15573 450 aaPredicted RBP18.76■□□□□ 0.59
CPSF7-204ENST00000413232 ANKRD20A2Q5SQ80 823 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 ANKRD20A1Q5TYW2 823 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 ANKRD20A3Q5VUR7 823 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 DENND5AQ6IQ26 1287 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 FAM199XQ6PEV8 388 aaPredicted RBP18.76■□□□□ 0.59
CPSF7-204ENST00000413232 FBXO38Q6PIJ6 1188 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 SARM1Q6SZW1 724 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 DAAM2Q86T65 1068 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 SIDT2Q8NBJ9 832 aaKnown RBP18.76■□□□□ 0.59
CPSF7-204ENST00000413232 UBXN4Q92575 508 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 COL26A1Q96A83 441 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 C12orf66Q96MD2 445 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 NRTNQ99748 197 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 ASB8Q9H765 288 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 HRASLS2Q9NWW9 162 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 PADI1Q9ULC6 663 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 TP53TG5Q9Y2B4 290 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 FER1L5A0AVI2 2057 aa18.76■□□□□ 0.59
CPSF7-204ENST00000413232 OR5K3A6NET4 321 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 AGAP14A8MT82 685 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 CCL22O00626 93 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 CTNNA1P35221 906 aaKnown RBP18.75■□□□□ 0.59
CPSF7-204ENST00000413232 ARCN1P48444 511 aaKnown RBP18.75■□□□□ 0.59
CPSF7-204ENST00000413232 DNASE1L3Q13609 305 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 SPARCL1Q14515 664 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 PLCL1Q15111 1095 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 LONRF2Q1L5Z9 754 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 OR2L2Q8NH16 312 aa18.75■□□□□ 0.59
CPSF7-204ENST00000413232 CCDC110Q8TBZ0 833 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms