RNA–Protein interactions for RNA: ENST00000412061.3

BRCA1-204, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,312 nt, Biotype non stop decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-204ENST00000412061 CFHR1Q03591 330 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 PMPCAQ10713 525 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 NAE1Q13564 534 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SLC39A14Q15043 492 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 HSPB2Q16082 182 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 ALG10Q5BKT4 473 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 ALG10BQ5I7T1 473 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 TTC39AQ5SRH9 613 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 RNASEH2BQ5TBB1 312 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 TBC1D9BQ66K14 1250 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SLC27A1Q6PCB7 646 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 AAGABQ6PD74 315 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 ZNF66Q6ZN08 573 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 TMEM182Q6ZP80 229 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 LPCAT2Q7L5N7 544 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 DET1Q7L5Y6 550 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 TRAPPC11Q7Z392 1133 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 CCDC83Q8IWF9 413 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 ELMOD2Q8IZ81 293 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 GALNT16Q8N428 558 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 NCOA7Q8NI08 942 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 C9orf43Q8TAL5 461 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 MSI2Q96DH6 328 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 PKP2Q99959 881 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 P2RY12Q9H244 342 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 AKIRIN1Q9H9L7 192 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 ZNF304Q9HCX3 659 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 CHMP1AQ9HD42 196 aaPredicted RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 PDGFCQ9NRA1 345 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 TAS2R14Q9NYV8 317 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SPG21Q9NZD8 308 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 POLLQ9UGP5 575 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 LAMP3Q9UQV4 416 aa4.46□□□□□ -1.7
BRCA1-204ENST00000412061 SEC23IPQ9Y6Y8 1000 aaKnown RBP4.46□□□□□ -1.7
BRCA1-204ENST00000412061 MST1RQ04912 1400 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 C5orf51A6NDU8 294 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 FOXO6A8MYZ6 492 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TRIM77I1YAP6 450 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 UBXN8O00124 270 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 CACNB4O00305 520 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 EBAG9O00559 213 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 RASGRF2O14827 1237 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TTI1O43156 1089 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SELENOFO60613 162 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 UGDHO60701 494 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ATP2C2O75185 946 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 MED24O75448 989 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 AKR7A3O95154 331 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 DIRAS3O95661 229 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 MT-ATP6P00846 226 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TGFAP01135 160 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 GH1P01241 217 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 OPN1MWP04001 364 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ABHD2P08910 425 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TSPY4P0CV99 314 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TSPY10P0CW01 314 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 OPN1MW2P0DN77 364 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 OPN1MW3P0DN78 364 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ETFAP13804 333 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TCF4P15884 667 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 CYP11B2P19099 503 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 YWHAQP27348 245 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ADSSP30520 456 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SULT1E1P49888 294 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 GAMTQ14353 236 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 FAM98BQ52LJ0 330 aaKnown RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 IFI44LQ53G44 452 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 KLHL26Q53HC5 615 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 CCDC183Q5T5S1 534 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 CES4AQ5XG92 561 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 CASC4Q6P4E1 433 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 RBM43Q6ZSC3 357 aaKnown RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 INTS8Q75QN2 995 aaKnown RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ARMC9Q7Z3E5 817 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ADGRG3Q86Y34 549 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SERPINA12Q8IW75 414 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 DDIASQ8IXT1 998 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SLC35F3Q8IY50 421 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 MAML2Q8IZL2 1156 aaPredicted RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 KDM8Q8N371 416 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 ZBTB2Q8N680 514 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 CCNYQ8ND76 341 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 GJC3Q8NFK1 279 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 OR4N2Q8NGD1 307 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 LRRC8CQ8TDW0 803 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TRPC4APQ8TEL6 797 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 NSMAFQ92636 917 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 MRPL38Q96DV4 380 aaKnown RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 EEF2KMTQ96G04 330 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 EGLN2Q96KS0 407 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SLITRK1Q96PX8 696 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SH2D3AQ9BRG2 576 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 WDR83Q9BRX9 315 aaKnown RBP4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SEMA4CQ9C0C4 833 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 SOHLH2Q9NX45 425 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 TMOD2Q9NZR1 351 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 KLHL13Q9P2N7 655 aa4.45□□□□□ -1.7
BRCA1-204ENST00000412061 UTS2RQ9UKP6 389 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms