RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 DHFR2Q86XF0 187 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 SPPL2CQ8IUH8 684 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 DENND1CQ8IV53 801 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 TMEM102Q8N9M5 508 aaPredicted RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 LPCAT1Q8NF37 534 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 HTRA1Q92743 480 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 VPS33AQ96AX1 596 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 MAP6Q96JE9 813 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 C1orf50Q9BV19 199 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 POLR3BQ9NW08 1133 aaPredicted RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 VPS28Q9UK41 221 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 BOLA1Q9Y3E2 137 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 ZFP37Q9Y6Q3 630 aaPredicted RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 WASH4PA8MWX3 477 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 RPP40O75818 363 aaKnown RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 DNAJB1P25685 340 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 HSPA13P48723 471 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 APLP1P51693 650 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 RFTN1Q14699 578 aaPredicted RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 LYPD8Q6UX82 237 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 PIWIL3Q7Z3Z3 882 aaKnown RBP16.48■□□□□ 0.23
PDK1-203ENST00000410055 GLT6D1Q7Z4J2 308 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 LINC01599Q8WXQ3 324 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 FERD3LQ96RJ6 166 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 ACOX2Q99424 681 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 GPR21Q99679 349 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 GKN1Q9NS71 199 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 IKZF3Q9UKT9 509 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 ANGPTL3Q9Y5C1 460 aa16.48■□□□□ 0.23
PDK1-203ENST00000410055 LOC285095A0A1B0GVY8 99 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 MEN1O00255 615 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 BTN3A1O00481 513 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 OR1I1O60431 355 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 MT-ND1P03886 318 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 GNAO1P09471 354 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 RAD23AP54725 363 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CTAG1AP78358 180 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CAP1Q01518 475 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 SUZ12Q15022 739 aaKnown RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 PTPRNQ16849 979 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 FBXO39Q8N4B4 442 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 C8orf48Q96LL4 319 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CINPQ9BW66 212 aaPredicted RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 NPLQ9BXD5 320 aaPredicted RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 MRPL9Q9BYD2 267 aaKnown RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 DOCK4Q8N1I0 1966 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 NPEPPSL1A6NEC2 478 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 PAPSS2O95340 614 aaPredicted RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 ZNF26P17031 533 aaPredicted RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 PRKACAP17612 351 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 SLC6A4P31645 630 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 NEK5Q6P3R8 708 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 TTC33Q6PID6 262 aaPredicted RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 TTC30BQ8N4P2 665 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 PSD4Q8NDX1 1056 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CDK15Q96Q40 435 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 PTPRDP23468 1912 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 PRRC2BQ5JSZ5 2229 aaKnown RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 NLRC5Q86WI3 1866 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 A0A087WXM4 84 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 LINC00854A0A1B0GVQ3 168 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 IQCF5A8MTL0 148 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 IDH3BO43837 385 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 NOL3O60936 208 aaKnown RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 CDH1P12830 882 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 MTHFD2P13995 350 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CAPN3P20807 821 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 FDXRP22570 491 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 TIAL1Q01085 375 aaKnown RBP eCLIP16.47■□□□□ 0.232e-7■■■□□ 17.5
PDK1-203ENST00000410055 RHDQ02161 417 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CHRNEQ04844 493 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 ZRANB3Q5FWF4 1079 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.47■□□□□ 0.23
PDK1-203ENST00000410055 ZBTB49Q6ZSB9 765 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 FRA10AC1Q70Z53 315 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CARM1Q86X55 608 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 UPF3AQ9H1J1 476 aaKnown RBP16.47■□□□□ 0.23
PDK1-203ENST00000410055 COQ3Q9NZJ6 369 aa16.47■□□□□ 0.23
PDK1-203ENST00000410055 CENPBD1B2RD01 187 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 NIPSNAP2O75323 286 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 MFN2O95140 757 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 GJB5O95377 273 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 CLIC3O95833 236 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 FGF1P05230 155 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 RBBP7Q16576 425 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 PARP15Q460N3 678 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 SAMD4BQ5PRF9 694 aaKnown RBP16.46■□□□□ 0.23
PDK1-203ENST00000410055 TRAF7Q6Q0C0 670 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 SLCO4A1Q96BD0 722 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 FUBP3Q96I24 572 aaKnown RBP eCLIP16.46■□□□□ 0.231e-6■■■■□ 26.4
PDK1-203ENST00000410055 ZNF641Q96N77 438 aaPredicted RBP16.46■□□□□ 0.23
PDK1-203ENST00000410055 SLC30A3Q99726 388 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 TUBB1Q9H4B7 451 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 SUCOQ9UBS9 1254 aaKnown RBP16.46■□□□□ 0.23
PDK1-203ENST00000410055 ABT1Q9ULW3 272 aaKnown RBP16.46■□□□□ 0.23
PDK1-203ENST00000410055 SLC8A2Q9UPR5 921 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 MTMR11A4FU01 709 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 PRAMEF11O60813 436 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 B3GALNT1O75752 331 aa16.46■□□□□ 0.23
PDK1-203ENST00000410055 HLA-DPA1P20036 260 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms