RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 LCKP06239 509 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 CYC1P08574 325 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 DANCRP0C864 163 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 TSPY4P0CV99 314 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 TSPY10P0CW01 314 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 HSPA5P11021 654 aaKnown RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 PDHBP11177 359 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 SFTPCP11686 197 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 BMP5P22003 454 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 KELP23276 732 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 AZGP1P25311 298 aaKnown RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 CCND2P30279 289 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 CCND3P30281 292 aaPredicted RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 CHRNA3P32297 505 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 SERPINB6P35237 376 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 FOLR3P41439 243 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 TRA2BP62995 288 aaKnown RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 GUCY1B3Q02153 619 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 MRPL28Q13084 256 aaKnown RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 TP53BP2Q13625 1128 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 SPOUT1Q5T280 376 aaKnown RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 PRAMEF8Q5VWM4 474 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 SIGIRRQ6IA17 410 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 NCAPH2Q6IBW4 605 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 IRGCQ6NXR0 463 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 TRILQ7L0X0 811 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 SERPINA11Q86U17 422 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 CCDC190Q86UF4 302 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 SERPINA12Q8IW75 414 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 EXOC6Q8TAG9 804 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 WDR20Q8TBZ3 569 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 RNASE8Q8TDE3 154 aaKnown RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 TFAP2BQ92481 460 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 RIT1Q92963 219 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 RAB7BQ96AH8 199 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 OTULINQ96BN8 352 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 OTUB1Q96FW1 271 aaPredicted RBP4.83□□□□□ -1.64
LSM5-205ENST00000409952 CNDP1Q96KN2 507 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 ZNF570Q96NI8 536 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 AIFM2Q9BRQ8 373 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 WNT5BQ9H1J7 359 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 KLHL1Q9NR64 748 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 FAM118AQ9NWS6 357 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 ANKRD10Q9NXR5 420 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 OR6C3Q9NZP0 311 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 STK26Q9P289 416 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 TRIM10Q9UDY6 481 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 OR14J1Q9UGF5 321 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 MAD2L2Q9UI95 211 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 MTUS1Q9ULD2 1270 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 WDR37Q9Y2I8 494 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 WNT6Q9Y6F9 365 aa4.83□□□□□ -1.64
LSM5-205ENST00000409952 CYP2D7A0A087X1C5 515 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CCDC169A6NNP5 214 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 BTBD19C9JJ37 291 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 H0YCG3 227 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CACNB4O00305 520 aaPredicted RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 RRHO14718 337 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 NME6O75414 186 aaPredicted RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 NEURL1O76050 574 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 DIRAS3O95661 229 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PTBP3O95758 552 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 TTLL1O95922 423 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 RAB40ALP0C0E4 278 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 SBK2P0C263 348 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PLA2G4BP0C869 781 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 TFPIP10646 304 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PRG2P13727 222 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 NCF1P14598 390 aaPredicted RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 AREGP15514 252 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CHATP28329 748 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 NMBRP28336 390 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 TKTP29401 623 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 MDH1P40925 334 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 ARCN1P48444 511 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 SULT1E1P49888 294 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 SERPINH1P50454 418 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 ASCL1P50553 236 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 HMGA2P52926 109 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 GAD2Q05329 585 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 ELP6Q0PNE2 266 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 TNK1Q13470 666 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PKP1Q13835 747 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 MAPK11Q15759 364 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 FAM174BQ3ZCQ3 159 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CCDC40Q4G0X9 1142 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 GLIPR1L2Q4G1C9 344 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 FASTKD1Q53R41 847 aaKnown RBP4.82□□□□□ -1.64
LSM5-205ENST00000409952 DDX59Q5T1V6 619 aaKnown RBP eCLIP4.82□□□□□ -1.64
LSM5-205ENST00000409952 RIPPLY2Q5TAB7 128 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 KIAA0895LQ68EN5 471 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 AAGABQ6PD74 315 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 ENPP7Q6UWV6 458 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 LRIG3Q6UXM1 1119 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CYB5R4Q7L1T6 521 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 LPCAT2Q7L5N7 544 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PRSS42Q7Z5A4 293 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 IRF2BP2Q7Z5L9 587 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 PIGWQ7Z7B1 504 aa4.82□□□□□ -1.64
LSM5-205ENST00000409952 CAMK1DQ8IU85 385 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms