RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 MCMBPQ9BTE3 642 aa16.26■□□□□ 0.19
TSPAN4-208ENST00000409531 DHRS4Q9BTZ2 278 aa16.26■□□□□ 0.19
TSPAN4-208ENST00000409531 DNMT3AQ9Y6K1 912 aaPredicted RBP16.26■□□□□ 0.19
TSPAN4-208ENST00000409531 DGKBQ9Y6T7 804 aa16.26■□□□□ 0.19
TSPAN4-208ENST00000409531 E5RI56 91 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 DYNC1I1O14576 645 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 RASGRF2O14827 1237 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 KMOO15229 486 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 GRID2O43424 1007 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 DNAJC6O75061 913 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 RASGRP1O95267 797 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 ITGA2BP08514 1039 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 EPHA8P29322 1005 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 SIM1P81133 766 aaPredicted RBP16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 PPARDQ03181 441 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 FZD2Q14332 565 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 INAVAQ3KP66 663 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 UGT3A1Q6NUS8 523 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 GPATCH11Q8N954 259 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 DCAKDQ8WVC6 231 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 KCNJ9Q92806 393 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 MTBPQ96DY7 904 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 ATXN7L3BQ96GX2 97 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 GPR22Q99680 433 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 AARSD1Q9BTE6 412 aaKnown RBP16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 TMEM109Q9BVC6 243 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 CYP4F12Q9HCS2 524 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 FGF22Q9HCT0 170 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 ZNHIT2Q9UHR6 403 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 SUFUQ9UMX1 484 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 BTBD3Q9Y2F9 522 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 TMEM131Q92545 1883 aa16.25■□□□□ 0.19
TSPAN4-208ENST00000409531 IQANK1A0A1B0GTG1 560 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 SPAARA0A1B0GVQ0 90 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 FAM95CA0A1B0GW59 222 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 KPNA5O15131 536 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 KCNJ13O60928 360 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 VPS26AO75436 327 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 FAM155BO75949 473 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 TNFP01375 233 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 F7P08709 466 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 VCLP18206 1134 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 CD9P21926 228 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 CTSCP53634 463 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 SLC12A2P55011 1212 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 POU4F1Q01851 419 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 ALG11Q2TAA5 492 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 PYCR3Q53H96 274 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 CTSL3PQ5NE16 218 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 TPRG1LQ5T0D9 272 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 GLRX5Q86SX6 157 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 OR2W6PQ8NHA6 318 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 BAHD1Q8TBE0 780 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 OR1E3Q8WZA6 343 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 ANKRD7Q92527 254 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 CCDC97Q96F63 343 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 TSPAN17Q96FV3 270 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 PDXPQ96GD0 296 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 ELMO2Q96JJ3 720 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 PKNOX2Q96KN3 472 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 LINC00615Q96LM1 132 aaPredicted RBP16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 ZIM3Q96PE6 472 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 CCM2Q9BSQ5 444 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 VIPAS39Q9H9C1 493 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 CARS2Q9HA77 564 aaKnown RBP16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 TAS2R13Q9NYV9 303 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 VWA7Q9Y334 891 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 NFS1Q9Y697 457 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 PRSS21Q9Y6M0 314 aa16.24■□□□□ 0.19
TSPAN4-208ENST00000409531 C17orf113A0A1B0GUU1 675 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 H3BM21 787 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 SGTAO43765 313 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 SNRPAP09012 282 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 CHRM3P20309 590 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 GCAP28676 217 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 SKIV2L2P42285 1042 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 ABCG1P45844 678 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 GNPDA1P46926 289 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 HK3P52790 923 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 DNAJC3Q13217 504 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 LRP8Q14114 963 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 HECTD2Q5U5R9 776 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 ZNF549Q6P9A3 640 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 CRTC3Q6UUV7 619 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 KANSL1Q7Z3B3 1105 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 RD3Q7Z3Z2 195 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 HID1Q8IV36 788 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 EPS8L3Q8TE67 593 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 TSACCQ96A04 125 aaPredicted RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 OR2M4Q96R27 311 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 TIMM29Q9BSF4 260 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 SLC13A1Q9BZW2 595 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 MRPL40Q9NQ50 206 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 SPATS2LQ9NUQ6 558 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 TRNAU1APQ9NX07 287 aaKnown RBP16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 DNAJC28Q9NX36 388 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 GPSM3Q9Y4H4 160 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 ACACBO00763 2458 aa16.23■□□□□ 0.19
TSPAN4-208ENST00000409531 TLDC2A0PJX2 215 aa16.22■□□□□ 0.19
TSPAN4-208ENST00000409531 SMIM23A6NLE4 172 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms