RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 POLR1BQ9H9Y6 1135 aa9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 PHPT1Q9NRX4 125 aaPredicted RBP9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 PDP2Q9P2J9 529 aa9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF180Q9UJW8 692 aa9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 CNOT6Q9ULM6 557 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 SLC17A4Q9Y2C5 497 aa9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 FAM32AQ9Y421 112 aaKnown RBP9.58□□□□□ -0.88
NIF3L1-202ENST00000409020 COL12A1Q99715 3063 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 C1orf232A0A0U1RR37 186 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 FADS2P1A8MWK0 482 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 D6RAR5 112 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SPOPO43791 374 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 TCEA3O75764 348 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 LCA5LO95447 670 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 MT-CYBP00156 380 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SLC4A1P02730 911 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 KELP23276 732 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 GSTT1P30711 240 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 ADCY8P40145 1251 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 ABCG1P45844 678 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 LSSP48449 732 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 TLE3Q04726 772 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 PCSK7Q16549 785 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 C14orf28Q4W4Y0 310 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SOWAHCQ53LP3 525 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF648Q5T619 568 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 DEPDC1Q5TB30 811 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 LRRC38Q5VT99 294 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 IL23RQ5VWK5 629 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 OR52E8Q6IFG1 317 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF662Q6ZS27 426 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 LYSMD3Q7Z3D4 306 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SPRED1Q7Z699 444 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SPACA3Q8IXA5 215 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 LINC00469Q8N7U9 141 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SDCCAG3Q96C92 435 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 IMP4Q96G21 291 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 COX14Q96I36 57 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 C10orf88Q9H8K7 445 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 UBP1Q9NZI7 540 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 TAAR2Q9P1P5 351 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 LRIT1Q9P2V4 623 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 AMACRQ9UHK6 382 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 SHOC2Q9UQ13 582 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 REXO2Q9Y3B8 237 aaKnown RBP9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 PCDHA13Q9Y5I0 950 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 ALG6Q9Y672 507 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 DUSP10Q9Y6W6 482 aa9.57□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF462Q96JM2 2506 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF487B1APH4 448 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 ANKRD66B4E2M5 251 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 AURKAO14965 403 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 ARHGAP6O43182 974 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 IDH3BO43837 385 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 DXOO77932 396 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 PTPN3P26045 913 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 LSP1P33241 339 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 CD68P34810 354 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 HALP42357 657 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 OR1D5P58170 312 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 GNG11P61952 73 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 PRKD1Q15139 912 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 SPOCD1Q6ZMY3 1216 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 C17orf82Q86X59 251 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 CCNJLQ8IV13 435 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 SCUBE1Q8IWY4 988 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 ZDHHC1Q8WTX9 485 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 TADA1Q96BN2 335 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 SCARF2Q96GP6 870 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 SLC46A1Q96NT5 459 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 GFM1Q96RP9 751 aaKnown RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 LYSMD1Q96S90 227 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 CCT8L2Q96SF2 557 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 LRRN3Q9H3W5 708 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 PRORYQ9H606 182 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 RDH14Q9HBH5 336 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 EPB41L5Q9HCM4 733 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 PFDN4Q9NQP4 134 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 SCOCQ9UIL1 159 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 APPL1Q9UKG1 709 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 INTUQ9ULD6 942 aa9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 ARHGEF17Q96PE2 2063 aaPredicted RBP9.56□□□□□ -0.88
NIF3L1-202ENST00000409020 TRBV23OR9-2A0A075B6M9 112 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 hCG_1818297A0A087WSY0 165 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 A0A0J9YVX5 310 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 A0A0U1RQJ8 604 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 FANCGO15287 622 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 B4GAT1O43505 415 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CST8O60676 142 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SNX2O60749 519 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ACADSP16219 412 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 GLB1P16278 677 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 ZNF30P17039 623 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 CES1P23141 567 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 TEAD1P28347 426 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SLC1A1P43005 524 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 SPINT3P49223 89 aa9.55□□□□□ -0.88
NIF3L1-202ENST00000409020 B4GALNT1Q00973 533 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms