RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 ESX1Q8N693 406 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 FAM71DQ8N9W8 422 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 CCDC110Q8TBZ0 833 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 SLC37A2Q8TED4 501 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 ATG4AQ8WYN0 398 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 FCRL5Q96RD9 977 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 VAT1Q99536 393 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 TMEM121Q9BTD3 319 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 MLPHQ9BV36 600 aaPredicted RBP6.11□□□□□ -1.43
RPA3-204ENST00000406109 TDRD1Q9BXT4 1180 aaKnown RBP6.11□□□□□ -1.43
RPA3-204ENST00000406109 CARD9Q9H257 536 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 TRIT1Q9H3H1 467 aaKnown RBP6.11□□□□□ -1.43
RPA3-204ENST00000406109 MLXIPLQ9NP71 852 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 FAM153AQ9UHL3 310 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 RSPH14Q9UHP6 348 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 ERRFI1Q9UJM3 462 aaPredicted RBP6.11□□□□□ -1.43
RPA3-204ENST00000406109 CROTQ9UKG9 612 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 DNPEPQ9ULA0 475 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 SRPK3Q9UPE1 567 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 ZNF148Q9UQR1 794 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 PPIL1Q9Y3C6 166 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 JRKLQ9Y4A0 524 aa6.11□□□□□ -1.43
RPA3-204ENST00000406109 CCDC88CQ9P219 2028 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 A0A0J9YYE9 177 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 A6NCN8 305 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 GOLGA6CA6NDK9 693 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 GOLGA6BA6NDN3 693 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 C5orf60A6NFR6 353 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 NPIPB15A6NHN6 443 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 POLR1CO15160 346 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 RFPL1O75677 317 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 ZNF189O75820 626 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 ANXA9O76027 345 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 HEXIM1O94992 359 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 CLDN7O95471 211 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 DDAH2O95865 285 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 AGTP01019 485 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 LDLRP01130 860 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 PRLP01236 227 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 TRBC1P01850 177 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 FGGP02679 453 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 ATP1A1P05023 1023 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 PIRTP0C851 137 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 GOLGA6DP0CG33 693 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 LHCGRP22888 699 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 TEAD1P28347 426 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 TNFRSF8P28908 595 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 STIP1P31948 543 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 DLSTP36957 453 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 ACTR1BP42025 376 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 WNT3AP56704 352 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 ACTR1AP61163 376 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 RPL26P61254 145 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 PTSQ03393 145 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 MRPL49Q13405 166 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 SEMA5AQ13591 1074 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 LAMB3Q13751 1172 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 PARP6Q2NL67 630 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 PRR30Q53SZ7 412 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 PAPD7Q5XG87 772 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 LRRC66Q68CR7 880 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 ITPRIPL1Q6GPH6 555 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 Q6ZVL8 140 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 GSTA5Q7RTV2 222 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 MAMDC2Q7Z304 686 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 TECPR1Q7Z6L1 1165 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 TAB3Q8N5C8 712 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 SLC25A41Q8N5S1 370 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 Q8NA96 180 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 GALNT6Q8NCL4 622 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 IPMKQ8NFU5 416 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 OR10G6Q8NH81 332 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 SLC35B2Q8TB61 432 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 CCHCR1Q8TD31 782 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 MAIP1Q8WWC4 291 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 NCSTNQ92542 709 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 TADA1Q96BN2 335 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 NUS1Q96E22 293 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 DTD2Q96FN9 168 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 MS4A14Q96JA4 679 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 PBKQ96KB5 322 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 SPATA13Q96N96 652 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 FRMD8P1Q9BZ68 369 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 ZNF768Q9H5H4 540 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 AKIRIN1Q9H9L7 192 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 PHPT1Q9NRX4 125 aaPredicted RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 GOLGA6AQ9NYA3 693 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 CD84Q9UIB8 345 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 RPL26L1Q9UNX3 145 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 SHOC2Q9UQ13 582 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 POLHQ9Y253 713 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 TMEM98Q9Y2Y6 226 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 AAR2Q9Y312 384 aaKnown RBP6.1□□□□□ -1.43
RPA3-204ENST00000406109 PCDHGA6Q9Y5G7 932 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.1□□□□□ -1.435e-6■■□□□ 11.7
RPA3-204ENST00000406109 ACANP16112 2415 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 ANKRD12Q6UB98 2062 aa6.1□□□□□ -1.43
RPA3-204ENST00000406109 CROCCQ5TZA2 2017 aa6.09□□□□□ -1.43
RPA3-204ENST00000406109 MN1Q10571 1320 aaPredicted RBP6.09□□□□□ -1.43
RPA3-204ENST00000406109 C1orf232A0A0U1RR37 186 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms