RNA–Protein interactions for RNA: ENST00000403971.2

HMGB3P19-201, Transcript of high mobility group box 3 pseudogene 19, humanhuman

BASIC

Gene HMGB3P19, Length 560 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P19-201ENST00000403971 ZNF609O15014 1411 aa4.94□□□□□ -1.62
HMGB3P19-201ENST00000403971 A0A0U1RQJ8 604 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CLEC18AA5D8T8 446 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 H0YIN7 160 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 HS6ST1O60243 411 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 TPPPO94811 219 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 SBF1O95248 1867 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 TUBBP07437 444 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 PRSS2P07478 247 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 ANXA7P20073 488 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 MX1P20591 662 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 BDKRB2P30411 391 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CDKN2AP42771 156 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 TAS2R40P59535 323 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 ACSM2AQ08AH3 577 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 TFCP2Q12800 502 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CDC16Q13042 620 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 SOWAHCQ53LP3 525 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 BMP2KLQ5H9B9 411 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 RAB41Q5JT25 222 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 ACSM2BQ68CK6 577 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 DUS1LQ6P1R4 473 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 SDCCAG8Q86SQ7 713 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 AACSQ86V21 672 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 TICAM2Q86XR7 235 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 RNF168Q8IYW5 571 aaPredicted RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 BEST3Q8N1M1 668 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CLEC18CQ8NCF0 446 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 APBB2Q92870 758 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 ORAI1Q96D31 301 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CALML4Q96GE6 196 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 ZNF479Q96JC4 524 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 EGLN2Q96KS0 407 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 SH3GL2Q99962 352 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 NCAPGQ9BPX3 1015 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 NTPCRQ9BSD7 190 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 MMTAG2Q9BU76 263 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 MXD3Q9BW11 206 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 PUS3Q9BZE2 481 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CCDC68Q9H2F9 335 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 IL1RAPL2Q9NP60 686 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 LTB4R2Q9NPC1 389 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 MTMR10Q9NXD2 777 aa4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 CWC15Q9P013 229 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 ATXN2Q99700 1313 aaKnown RBP4.93□□□□□ -1.62
HMGB3P19-201ENST00000403971 A0A1B0GUL7 405 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 DDNO94850 711 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 ICAM1P05362 532 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 SRPRAP08240 638 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 IGHV4-30-4P0DP06 118 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 TMEM11P17152 192 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 DDX5P17844 614 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 ACADLP28330 430 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 PRCPP42785 496 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 RAD23BP54727 409 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 HNRNPH2P55795 449 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 BRWD1-AS2P59051 145 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 NFATC4Q14934 902 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 CTF1Q16619 201 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 PNLIPRP3Q17RR3 467 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 EFHC1Q5JVL4 640 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 KCTD18Q6PI47 426 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 RHBDF2Q6PJF5 856 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 C15orf52Q6ZUT6 534 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 ARHGAP30Q7Z6I6 1101 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 PCDH20Q8N6Y1 951 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 Q8N9P0 234 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 FAM216AQ8WUB2 273 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 SCMH1Q96GD3 660 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 PGAM5Q96HS1 289 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 PCYT2Q99447 389 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 CMKLR1Q99788 373 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 MAK16Q9BXY0 300 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 ECHDC1Q9NTX5 307 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 PAG1Q9NWQ8 432 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 SUCLA2Q9P2R7 463 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 OR14J1Q9UGF5 321 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 DBNLQ9UJU6 430 aaKnown RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 ATP6V0A2Q9Y487 856 aa4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 ZNF646O15015 1829 aaPredicted RBP4.92□□□□□ -1.62
HMGB3P19-201ENST00000403971 MYH2Q9UKX2 1941 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 DUOX1Q9NRD9 1551 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 SNED1Q8TER0 1413 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 SRRM3A6NNA2 597 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 M0QZ24 198 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 OGG1O15527 345 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 EIF5BO60841 1220 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 TSPAN9O75954 239 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 NGFRP08138 427 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 UQCRFS1P1P0C7P4 283 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 PLA2G2AP14555 144 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 UBA1P22314 1058 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 KCNJ4P48050 445 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 NANOS2P60321 138 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 TIMM10P62072 90 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 CSNK2A1P68400 391 aaPredicted RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 MRPS34P82930 218 aaKnown RBP4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 ZBED6P86452 979 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 TFAP4Q01664 338 aa4.91□□□□□ -1.62
HMGB3P19-201ENST00000403971 GRSF1Q12849 480 aaKnown RBP eCLIP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms