RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 HAUS5O94927 633 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 TRIM16O95361 564 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 FTH1P02794 183 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ECHS1P30084 290 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 SSTR1P30872 391 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 MPP1Q00013 466 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CLCA4Q14CN2 919 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 BRD3Q15059 726 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ZNF658BQ4V348 819 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CTSL3PQ5NE16 218 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PERM1Q5SV97 790 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 TEDDM1Q5T9Z0 273 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 RNF187Q5TA31 235 aaPredicted RBP16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ABRAXAS1Q6UWZ7 409 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 LRRC6Q86X45 466 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 LMNTD2Q8IXW0 634 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 IFT20Q8IY31 132 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 SFRP1Q8N474 314 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 GSDMBQ8TAX9 411 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 MAPK15Q8TD08 544 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 LKAAEAR1Q8TD35 194 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CALML6Q8TD86 181 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 SLC37A2Q8TED4 501 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 BIRC8Q96P09 236 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 VPS37BQ9H9H4 285 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 EVA1BQ9NVM1 165 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 SLC17A6Q9P2U8 582 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 LRIT1Q9P2V4 623 aa16.86■□□□□ 0.29
PTCHD3P3-201ENST00000403073 QSOX1O00391 747 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CASC3O15234 703 aaKnown RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PPM1DO15297 605 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 RPS3P23396 243 aaKnown RBP eCLIP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PREPP48147 710 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 GPX6P59796 221 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 FRG1Q14331 258 aaKnown RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 N4BP2L1Q5TBK1 243 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 AGAP9Q5VTM2 703 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 WASH2PQ6VEQ5 465 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 C3orf62Q6ZUJ4 267 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 C2CD4AQ8NCU7 369 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 HM13Q8TCT9 377 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ELMO1Q92556 727 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CCDC74AQ96AQ1 378 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 FAM129AQ9BZQ8 928 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PHACTR1Q9C0D0 580 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 WWP1Q9H0M0 922 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 COG4Q9H9E3 785 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 WASH6PQ9NQA3 447 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 INTS10Q9NVR2 710 aaKnown RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 MOCS1Q9NZB8 636 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ZNF624Q9P2J8 865 aaPredicted RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 MTRF1LQ9UGC7 380 aaKnown RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 RABGEF1Q9UJ41 708 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 GNPTGQ9UJJ9 305 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ACSL5Q9ULC5 683 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 APOBEC2Q9Y235 224 aaKnown RBP16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PLXNB3Q9ULL4 1909 aa16.85■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ASCC3Q8N3C0 2202 aaKnown RBP16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PRAMEF33A0A0G2JMD5 474 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 KLHL33A6NCF5 533 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 OR5K4A6NMS3 321 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 OR52A4PA6NMU1 304 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 RFPL3O75679 317 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 SLC2A4P14672 509 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 GLB1P16278 677 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 GABRB3P28472 473 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PDHA2P29803 388 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CCR7P32248 378 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CSE1LP55060 971 aaKnown RBP16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 MGAT5Q09328 741 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 BIRC2Q13490 618 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CUL1Q13616 776 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 ZNF549Q6P9A3 640 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CNSTQ6PJW8 725 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CNTN4Q8IWV2 1026 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 Q8N9G6 341 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 SPDYE1Q8NFV5 336 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 INSM2Q96T92 566 aaPredicted RBP16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 CCDC3Q9BQI4 270 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 NFU1Q9UMS0 254 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 VPS9D1Q9Y2B5 631 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PCDHB1Q9Y5F3 818 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 PCDHGA1Q9Y5H4 931 aa16.84■□□□□ 0.29
PTCHD3P3-201ENST00000403073 KIR2DS5A0A0G2JLQ3 304 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 A0A0G2JNG1 304 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 RHPN2P1A8MT19 583 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 F8W8V4 182 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 KIR2DS3K7RE56 304 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 NUDT21O43809 227 aaKnown RBP16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 TDRD6O60522 2096 aaKnown RBP16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 NIPSNAP2O75323 286 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 PIAS1O75925 651 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 DKK1O94907 266 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 AHSGP02765 367 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 ESR1P03372 595 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 GSTM1P09488 218 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 PKMP14618 531 aaKnown RBP16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 XRCC1P18887 633 aaPredicted RBP16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 SLC19A1P41440 591 aa16.83■□□□□ 0.28
PTCHD3P3-201ENST00000403073 HALP42357 657 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms