RNA–Protein interactions for RNA: ENST00000401730.5

SNRNP70-202, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 2

Gene SNRNP70, Length 3,144 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-202ENST00000401730 CIPCQ9C0C6 399 aa16.81■□□□□ 0.28
SNRNP70-202ENST00000401730 PDFQ9HBH1 243 aa16.81■□□□□ 0.28
SNRNP70-202ENST00000401730 ANGPTL3Q9Y5C1 460 aa16.81■□□□□ 0.28
SNRNP70-202ENST00000401730 A0A087WXM4 84 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 C2orf78A6NCI8 922 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 TRIM43BA6NCK2 446 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 AQP12BA6NM10 295 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 J3QRK9 145 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 RPS17P08708 135 aaKnown RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 HMOX2P30519 316 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 RFC2P35250 354 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 POLR2IP36954 125 aaKnown RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 ZFP36L2P47974 494 aaKnown RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 DSC1Q08554 894 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 FAM117BQ6P1L5 589 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 ENPP6Q6UWR7 440 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 AQP12AQ8IXF9 295 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 LKAAEAR1Q8TD35 194 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 NCLNQ969V3 563 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 FBXL8Q96CD0 374 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 YIPF2Q9BWQ6 316 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 RNF38Q9H0F5 515 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 IPPKQ9H8X2 491 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 SLC52A3Q9NQ40 469 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 SMPD3Q9NY59 655 aaPredicted RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 KLQ9UEF7 1012 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 LEF1Q9UJU2 399 aaPredicted RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 SYCE1LA8MT33 242 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 E2F3O00716 465 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 GNGT2O14610 69 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 ALDH2P05091 517 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 UROSP10746 265 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 HSD17B1P14061 328 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 ALDH3B2P48448 385 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 YBEYP58557 167 aaPredicted RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 RCAN2Q14206 197 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 LCN8Q6JVE9 175 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 HACD2Q6Y1H2 254 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 ERI1Q8IV48 349 aaKnown RBP16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 TMEM199Q8N511 208 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 LIMD1Q9UGP4 676 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 SCN10AQ9Y5Y9 1956 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 TET1Q8NFU7 2136 aa16.8■□□□□ 0.28
SNRNP70-202ENST00000401730 SLC38A8A6NNN8 435 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 GSTA4O15217 222 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 OGNP20774 298 aaKnown RBP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 PRKG2Q13237 762 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 RAB39AQ14964 217 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ZUFSPQ96AP4 578 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 EID2BQ96D98 161 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 FUBP3Q96I24 572 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 PSKH2Q96QS6 385 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 CARS2Q9HA77 564 aaKnown RBP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 LATS2Q9NRM7 1088 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 SLC30A1Q9Y6M5 507 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 PTGES3LE9PB15 166 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ARVCFO00192 962 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ZBTB11O95625 1053 aaPredicted RBP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ALBP02768 609 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 EFNA1P20827 205 aaPredicted RBP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 SLC26A3P40879 764 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ATP4BP51164 291 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ACVR1Q04771 509 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 BNIP2Q12982 314 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ATP6AP1Q15904 470 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 CYBRD1Q53TN4 286 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 CYP20A1Q6UW02 462 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 GALNT10Q86SR1 603 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ITFG1Q8TB96 612 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 IKZF5Q9H5V7 419 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 VAPAQ9P0L0 249 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 COCHO43405 550 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 LRATO95237 230 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 ZNF182P17025 639 aaPredicted RBP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 CA8P35219 290 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 SLC11A2P49281 568 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 PLD1Q13393 1074 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 TYSND1Q2T9J0 566 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 FAM174BQ3ZCQ3 159 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 SLC36A3Q495N2 470 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 FUT10Q6P4F1 479 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 CDC26Q8NHZ8 85 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 UPF1Q92900 1129 aaKnown RBP eCLIP16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 TMBIM1Q969X1 311 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.79■□□□□ 0.285e-7■■■■□ 23.7
SNRNP70-202ENST00000401730 TADA1Q96BN2 335 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 MGME1Q9BQP7 344 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 DGCR6LQ9BY27 220 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 CCDC90BQ9GZT6 254 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 VPS4AQ9UN37 437 aa16.79■□□□□ 0.28
SNRNP70-202ENST00000401730 C1QCP02747 245 aa16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 SHMT2P34897 504 aa16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 ERVK-8P63133 956 aa16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 TAF1AQ15573 450 aaPredicted RBP16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 CPSF6Q16630 551 aaKnown RBP eCLIP16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 AARS2Q5JTZ9 985 aaKnown RBP16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 PRMT9Q6P2P2 845 aa16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 GCNT7Q6ZNI0 430 aa16.78■□□□□ 0.28
SNRNP70-202ENST00000401730 GOLGA7Q7Z5G4 137 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms