RNA–Protein interactions for RNA: ENST00000399455.2

USP47-203, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene USP47, Length 7,396 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-203ENST00000399455 HERPUD2Q9BSE4 406 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 RHOJQ9H4E5 214 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TMBIM4Q9HC24 238 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 RUVBL1Q9Y265 456 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 RGPD2P0DJD1 1756 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ALS2Q96Q42 1657 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 FAM170BA6NMN3 283 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ZNF726A6NNF4 738 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 KAT7O95251 611 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 SEPHS1P49903 392 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 GCNT6Q5T4J0 391 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 LRRC55Q6ZSA7 311 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 FAM81AQ8TBF8 368 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 EXOSC8Q96B26 276 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 TRMOQ9BU70 441 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 LRTM1Q9HBL6 345 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 SIT1Q9Y3P8 196 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 POLR3HQ9Y535 204 aaPredicted RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 MT-CO1P00395 513 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ATP1B2P14415 290 aaPredicted RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 MPIP34949 423 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ARFIP1P53367 373 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 MBOAT1Q6ZNC8 495 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 PIWIL4Q7Z3Z4 852 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 TXNDC5Q8NBS9 432 aaKnown RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 OR52K2Q8NGK3 314 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 JOSD2Q8TAC2 188 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 RHOBTB2Q9BYZ6 727 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 STMN3Q9NZ72 180 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 MCM8Q9UJA3 840 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 SCDO00767 359 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TP53I11O14683 189 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TGM5O43548 720 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TPST1O60507 370 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 CTBP1Q13363 440 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 FAM91A1Q658Y4 838 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 CADM2Q8N3J6 435 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ZNF276Q8N554 614 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 C12orf76Q8N812 135 aaPredicted RBP7.85□□□□□ -1.15
USP47-203ENST00000399455 C7orf43Q8WVR3 580 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TIGARQ9NQ88 270 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 IL33O95760 270 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 LDLRP01130 860 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ABHD2P08910 425 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 LAMP2P13473 410 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 LRPAP1P30533 357 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 POLE2P56282 527 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 SPIBQ01892 262 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 FAM214AQ32MH5 1076 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TAS1R3Q7RTX0 852 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TSPAN14Q8NG11 270 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 TCP10LQ8TDR4 215 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 KCTD4Q8WVF5 259 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 KCNJ9Q92806 393 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 OR52E6Q96RD3 313 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 PTGES2Q9H7Z7 377 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ZNF304Q9HCX3 659 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 ADAM21Q9UKJ8 722 aa7.85□□□□□ -1.15
USP47-203ENST00000399455 NHSQ6T4R5 1651 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 DYTNA2CJ06 578 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CENPXA8MT69 81 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PDPK1O15530 556 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 KLRC4O43908 158 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 SIN3BO75182 1162 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 RPL7AP62424 266 aaKnown RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 RCN1Q15293 331 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 TSTD2Q5T7W7 516 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PLEKHA7Q6IQ23 1121 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LRP10Q7Z4F1 713 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PROSER1Q86XN7 944 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 APOBEC3BQ9UH17 382 aaKnown RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 RARRES3Q9UL19 164 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 TPRKBQ9Y3C4 175 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 NDUFS4O43181 175 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 MFN2O95140 757 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 ITGA2BP08514 1039 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CLCNKAP51800 687 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 GSTM4Q03013 218 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CYP4F3Q08477 520 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 INAQ16352 499 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 MEA1Q16626 185 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PRAMEF14Q5SWL7 426 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PRAMEF13Q5VWM6 474 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 ERICH5Q6P6B1 374 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 NXPE3Q969Y0 559 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CNBD2Q96M20 576 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 PSKH2Q96QS6 385 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 SEPHS2Q99611 448 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 KCNH6Q9H252 994 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 THUMPD1Q9NXG2 353 aaKnown RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 BIRC5O15392 142 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 EVX2Q03828 476 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 NDUFAF6Q330K2 333 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 ARMC4Q5T2S8 1044 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 LCN1P1Q5VSP4 162 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 FSTL5Q8N475 847 aaPredicted RBP7.84□□□□□ -1.15
USP47-203ENST00000399455 CEP76Q8TAP6 659 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 FBXO30Q8TB52 745 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 CCT8L2Q96SF2 557 aa7.84□□□□□ -1.15
USP47-203ENST00000399455 GPR21Q99679 349 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms