RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 RNF187Q5TA31 235 aaPredicted RBP24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 PALM2Q8IXS6 379 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 KRT222Q8N1A0 295 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 LKAAEAR1Q8TD35 194 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 CALML6Q8TD86 181 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 SLC37A2Q8TED4 501 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 VPS37BQ9H9H4 285 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 NCKIPSDQ9NZQ3 722 aa24.9■■□□□ 1.58
TMEM55B-202ENST00000398020 BRAFP15056 766 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 ACP1P24666 158 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 BRD3Q15059 726 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 PTRHD1Q6GMV3 140 aaKnown RBP24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 IYDQ6PHW0 289 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 EFL1Q7Z2Z2 1120 aaKnown RBP24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 ARL14Q8N4G2 192 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 GSDMBQ8TAX9 411 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 IFI44Q8TCB0 444 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 BIRC8Q96P09 236 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 FOXP3Q9BZS1 431 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 FBXO5Q9UKT4 447 aa24.89■■□□□ 1.58
TMEM55B-202ENST00000398020 EME2A4GXA9 379 aaPredicted RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 PFDN6O15212 129 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 KCNJ13O60928 360 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 TRIM16O95361 564 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 FTH1P02794 183 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 MAGEA4P43358 317 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 DUSP3P51452 185 aaPredicted RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 CTSL3PQ5NE16 218 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 PERM1Q5SV97 790 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 METRNLQ641Q3 311 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 DGLUCYQ7Z3D6 616 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 C17orf82Q86X59 251 aaPredicted RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 SFRP1Q8N474 314 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 HM13Q8TCT9 377 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 ELMO1Q92556 727 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 PHACTR1Q9C0D0 580 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 INTS10Q9NVR2 710 aaKnown RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 MTRF1LQ9UGC7 380 aaKnown RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 GNPTGQ9UJJ9 305 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 RNF215Q9Y6U7 377 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 OR52A4PA6NMU1 304 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 QSOX1O00391 747 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 CASC3O15234 703 aaKnown RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 PIAS1O75925 651 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 PREPP48147 710 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 BOP1Q14137 746 aaKnown RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 ZNF658BQ4V348 819 aaPredicted RBP24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 LMNTD2Q8IXW0 634 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 IFT20Q8IY31 132 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 MAPK15Q8TD08 544 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 COG4Q9H9E3 785 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 LRIT1Q9P2V4 623 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 RABGEF1Q9UJ41 708 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 NFU1Q9UMS0 254 aa24.88■■□□□ 1.57
TMEM55B-202ENST00000398020 ASXL3Q9C0F0 2248 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 C17orf113A0A1B0GUU1 675 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 HAUS5O94927 633 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 RPS3P23396 243 aaKnown RBP eCLIP24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 CSE1LP55060 971 aaKnown RBP24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 GPX6P59796 221 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 CLCA4Q14CN2 919 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 TEDDM1Q5T9Z0 273 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 SPDYE1Q8NFV5 336 aaPredicted RBP24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 CCDC74AQ96AQ1 378 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 FAM136AQ96C01 138 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 FMO2Q99518 471 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 WWP1Q9H0M0 922 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 EVA1BQ9NVM1 165 aa24.87■■□□□ 1.57
TMEM55B-202ENST00000398020 KLHL33A6NCF5 533 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 RFPL3O75679 317 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 CCR7P32248 378 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 ABCG1P45844 678 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 BIRC2Q13490 618 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 CUL1Q13616 776 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 CNSTQ6PJW8 725 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 ABRAXAS1Q6UWZ7 409 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 LRRC6Q86X45 466 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 C2CD4AQ8NCU7 369 aaPredicted RBP24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 FAM129AQ9BZQ8 928 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 MOCS1Q9NZB8 636 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 VPS9D1Q9Y2B5 631 aa24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 CFAP20Q9Y6A4 193 aaKnown RBP24.86■■□□□ 1.57
TMEM55B-202ENST00000398020 RP1P56715 2156 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 PPM1DO15297 605 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 NIPSNAP2O75323 286 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 GLB1P16278 677 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 PDHA2P29803 388 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 AGAP9Q5VTM2 703 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 C3orf62Q6ZUJ4 267 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 ZNF761Q86XN6 746 aaPredicted RBP24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 CNTN4Q8IWV2 1026 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 NAT6Q93015 286 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 LRRC4CQ9HCJ2 640 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 ZFATQ9P243 1243 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 ZNF624Q9P2J8 865 aaPredicted RBP24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 ACSL5Q9ULC5 683 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 APOBEC2Q9Y235 224 aaKnown RBP24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 PRAMEF33A0A0G2JMD5 474 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 SLC2A4P14672 509 aa24.85■■□□□ 1.57
TMEM55B-202ENST00000398020 GABRB3P28472 473 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms