RNA–Protein interactions for RNA: ENST00000397606.7

PTPRD-204, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 5,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-204ENST00000397606 SRMSQ9H3Y6 488 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SLCO1B3Q9NPD5 702 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 AURKCQ9UQB9 309 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 ENTPD4Q9Y227 616 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 ACTL7AQ9Y615 435 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CCDC154A6NI56 674 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 C5orf67F2Z3F1 127 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 HOXC11O43248 304 aaPredicted RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 FKBP9O95302 570 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 TGDSO95455 350 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 GNAZP19086 355 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 STEAP4Q687X5 459 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 FKBP9P1Q75LS8 142 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CYP4X1Q8N118 509 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SRFBP1Q8NEF9 429 aaKnown RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 RPLP0P6Q8NHW5 317 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 LZICQ8WZA0 190 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 FOXJ1Q92949 421 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 FAM162AQ96A26 154 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SPDL1Q96EA4 605 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 C7orf26Q96N11 449 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 BBS4Q96RK4 519 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 MOCS1Q9NZB8 636 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 SUSD2Q9UGT4 822 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 PNMA8BQ9ULN7 279 aaPredicted RBP8.16□□□□□ -1.1
PTPRD-204ENST00000397606 COQ6Q9Y2Z9 468 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 CEP290O15078 2479 aa8.16□□□□□ -1.1
PTPRD-204ENST00000397606 RNF103-CHMP3A0A140T963 221 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 FFAR2O15552 330 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 CLCNKAP51800 687 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 CYP51A1Q16850 503 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 RBM20Q5T481 1227 aaKnown RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 PRMT9Q6P2P2 845 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 CRTC1Q6UUV9 634 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 BNC2Q6ZN30 1099 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 HEATR4Q86WZ0 1026 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SP7Q8TDD2 431 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 NOL11Q9H8H0 719 aaKnown RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 FANCEQ9HB96 536 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SGK2Q9HBY8 427 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 CCDC167Q9P0B6 97 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 HAO1Q9UJM8 370 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 PLXNA1Q9UIW2 1896 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 C15orf38-AP3S2A0A0A6YYH1 394 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 FAM170BA6NMN3 283 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 NPHS1O60500 1241 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 KERAO60938 352 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 LYPLA1O75608 230 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ENO2P09104 434 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 TNNI3P19429 210 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 TCN1P20061 433 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 CCND1P24385 295 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 RPL6Q02878 288 aaKnown RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 GTF2H2Q13888 395 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 INAVAQ3KP66 663 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SLC44A4Q53GD3 710 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ARL13AQ5H913 290 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 PLEKHS1Q5SXH7 462 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 FAM109BQ6ICB4 259 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 GTF2H2CQ6P1K8 395 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ARPINQ7Z6K5 226 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 PARP9Q8IXQ6 854 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 GPR135Q8IZ08 494 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 CBARPQ8N350 705 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 FCRL3Q96P31 734 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 GATA5Q9BWX5 397 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 GPR174Q9BXC1 333 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ARNT2Q9HBZ2 717 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 BTRCQ9Y297 605 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 IGLON5A6NGN9 336 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 GFRA2O00451 464 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SCAMP1O15126 338 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 COX7A2P14406 83 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 PCSK2P16519 638 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ACRV1P26436 265 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SOX9P48436 509 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SLC18A1P54219 525 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SQLEQ14534 574 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ARRDC2Q8TBH0 407 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 TFGQ92734 400 aaPredicted RBP8.15□□□□□ -1.1
PTPRD-204ENST00000397606 TEX12Q9BXU0 123 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 DERL2Q9GZP9 239 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 MTG2Q9H4K7 406 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SELENONQ9NZV5 590 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 ACSL5Q9ULC5 683 aa8.15□□□□□ -1.1
PTPRD-204ENST00000397606 SCN10AQ9Y5Y9 1956 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 CCDC189A1A4V9 331 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 H0Y858 1186 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 SEMA4FO95754 770 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 GSTM1P09488 218 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 CDH3P22223 829 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 PGFP49763 221 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 RPL38P63173 70 aaKnown RBP8.15□□□□□ -1.11
PTPRD-204ENST00000397606 SATB1Q01826 763 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 GSTM4Q03013 218 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 ACTN3Q08043 901 aaPredicted RBP8.15□□□□□ -1.11
PTPRD-204ENST00000397606 EML3Q32P44 896 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 MANEALQ5VSG8 457 aa8.15□□□□□ -1.11
PTPRD-204ENST00000397606 PARM1Q6UWI2 310 aa8.15□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms