RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 MAGEB17A8MXT2 336 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 LGALS8O00214 317 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 XPO1O14980 1071 aaKnown RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 TLX2O43763 284 aaPredicted RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 HAUS5O94927 633 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 YES1P07947 543 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 CYP3A4P08684 503 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 CDC25CP30307 473 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 TIA1P31483 386 aaKnown RBP eCLIP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 AKT2P31751 481 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 CLK3P49761 638 aaKnown RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PSMD7P51665 324 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 ZNF134P52741 427 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PRMT2P55345 433 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 TUBA1BP68363 451 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 NKX3-2P78367 333 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 SRSF5Q13243 272 aaKnown RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PDE7AQ13946 482 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 COL9A3Q14050 684 aaPredicted RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 ZRSR1Q15695 479 aaKnown RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 BCL7AQ4VC05 210 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 FAM90A2PQ658T7 463 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PODNL1Q6PEZ8 512 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 FOXR1Q6PIV2 292 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 TUBA1AQ71U36 451 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 EXOC3L1Q86VI1 746 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 ERO1BQ86YB8 467 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 SCYL3Q8IZE3 742 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 FMR1NBQ8N0W7 255 aaPredicted RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 C11orf44Q8N8P7 122 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 IGDCC4Q8TDY8 1250 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 SLC20A1Q8WUM9 679 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 TMEM171Q8WVE6 324 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PIBF1Q8WXW3 757 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 OVCA2Q8WZ82 227 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PABPC5Q96DU9 382 aaKnown RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 BSCL2Q96G97 398 aaPredicted RBP6.69□□□□□ -1.34
SMCO1-201ENST00000397537 KLHL32Q96NJ5 620 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PANX3Q96QZ0 392 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 UQCC2Q9BRT2 126 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 PINK1Q9BXM7 581 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 SIK2Q9H0K1 926 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 KCNK13Q9HB14 408 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 SLC22A11Q9NSA0 550 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 HYPKQ9NX55 129 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 TFCP2L1Q9NZI6 479 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 SHOC2Q9UQ13 582 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 ZNF148Q9UQR1 794 aa6.69□□□□□ -1.34
SMCO1-201ENST00000397537 LMO7Q8WWI1 1683 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 ANKRD50Q9ULJ7 1429 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 A0A1W2PQ45 241 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 A0A1W2PQY0 241 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 C17orf100A8MU93 164 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 GOLGA8SH3BPF8 625 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 CSF2P04141 144 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 IVLP07476 585 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 RALBP11234 206 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 NID1P14543 1247 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 EDN2P20800 178 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 TACR2P21452 398 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 OTX2P32243 289 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 MAGEA1P43355 309 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SLC11A1P49279 550 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 STARP49675 285 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 CCT8P50990 548 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 PRKAG1P54619 331 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 AIF1P55008 147 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 TAS2R40P59535 323 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SHC2P98077 582 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 MTAPQ13126 283 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 ZNF648Q5T619 568 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 LIN9Q5TKA1 542 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 GJB7Q6PEY0 223 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SIAH3Q8IW03 269 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SPARTQ8N0X7 666 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 C9orf43Q8TAL5 461 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 DNAJA4Q8WW22 397 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SPSB1Q96BD6 273 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 TRMT61AQ96FX7 289 aaKnown RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 FCRL4Q96PJ5 515 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 HAPLN3Q96S86 360 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 NPAS1Q99742 590 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 G6PC3Q9BUM1 346 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 MRI1Q9BV20 369 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 NTMT1Q9BV86 223 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 NPLQ9BXD5 320 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 TMEM168Q9H0V1 697 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 TRPV6Q9H1D0 765 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 DCTPP1Q9H773 170 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SRD5A3Q9H8P0 318 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 LMAN1LQ9HAT1 526 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 GLOD4Q9HC38 313 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 PIH1D3Q9NQM4 214 aaKnown RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 OR6C3Q9NZP0 311 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 SAE1Q9UBE0 346 aaPredicted RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 DDX25Q9UHL0 483 aaKnown RBP6.68□□□□□ -1.34
SMCO1-201ENST00000397537 MFHAS1Q9Y4C4 1052 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 KCPQ6ZWJ8 1503 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 CRB1P82279 1406 aa6.68□□□□□ -1.34
SMCO1-201ENST00000397537 NHSQ6T4R5 1651 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms