RNA–Protein interactions for RNA: ENST00000397511.6

SSR1-202, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 3,248 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-202ENST00000397511 IGSF8Q969P0 613 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PTERQ96BW5 349 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DUS3LQ96G46 650 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 DACH2Q96NX9 599 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 FCRL5Q96RD9 977 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 VAT1Q99536 393 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SEPT5Q99719 369 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 SEMA3CQ99985 751 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 MCMBPQ9BTE3 642 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 C9orf16Q9BUW7 83 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ZNF717Q9BY31 904 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 SOX17Q9H6I2 414 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 CATSPERBQ9H7T0 1116 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 MID1IP1Q9NPA3 183 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DIABLOQ9NR28 239 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RGS18Q9NS28 235 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ABCC13Q9NSE7 274 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 GMIPQ9P107 970 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 IFT80Q9P2H3 777 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 EVLQ9UI08 416 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 VWA7Q9Y334 891 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 MAU2Q9Y6X3 613 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TSC2P49815 1807 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 HEATR9A2RTY3 570 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 GLTPD2A6NH11 291 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 HAS3O00219 553 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ENPP3O14638 875 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ZW10O43264 779 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 BCAS1O75363 584 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 ASGR1P07306 291 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 NCK1P16333 377 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ATP5F1P24539 256 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 CTGFP29279 349 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PRDX3P30048 256 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 FMO4P31512 558 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 NUDT1P36639 197 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CAPGP40121 348 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 GEMP55040 296 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SH3BP2P78314 561 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 GRB7Q14451 532 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SEMA3AQ14563 771 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DGUOKQ16854 277 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PAGE2BQ5JRK9 111 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SIRPB2Q5JXA9 342 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SNAP47Q5SQN1 464 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 C10orf120Q5SQS8 335 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 AGAP9Q5VTM2 703 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 IRAK1BP1Q5VVH5 260 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 REP15Q6BDI9 236 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ERMP1Q7Z2K6 904 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PIWIL3Q7Z3Z3 882 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 ADCK1Q86TW2 530 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SPPL2CQ8IUH8 684 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CCDC103Q8IW40 242 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 SPARTQ8N0X7 666 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 THEM5Q8N1Q8 247 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 DHRSXQ8N5I4 330 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PTGR2Q8N8N7 351 aaPredicted RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 GALNT6Q8NCL4 622 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TRPV1Q8NER1 839 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CHAC2Q8WUX2 184 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 GIMAP1Q8WWP7 306 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ISL2Q96A47 359 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TUBGCP3Q96CW5 907 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 OMA1Q96E52 524 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CDK15Q96Q40 435 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CSF3RQ99062 836 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 MRPL57Q9BQC6 102 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 CLSTN3Q9BQT9 956 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ACBD6Q9BR61 282 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 MKRN2Q9H000 416 aaKnown RBP4.97□□□□□ -1.61
SSR1-202ENST00000397511 SLA2Q9H6Q3 261 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 RRAGCQ9HB90 399 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 ENTPD7Q9NQZ7 604 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 FBXO8Q9NRD0 319 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 CACNA2D2Q9NY47 1150 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 PCDHGA7Q9Y5G6 932 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 TRPV2Q9Y5S1 764 aa4.97□□□□□ -1.61
SSR1-202ENST00000397511 NYNRINQ9P2P1 1898 aaKnown RBP4.96□□□□□ -1.61
SSR1-202ENST00000397511 TCRBV3S1A0A5B6 114 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 CENPXA8MT69 81 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 IQCF5A8MTL0 148 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 A8MX80 341 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 M0R3G1 203 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 ARHGAP33O14559 1287 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 MRASO14807 208 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 MUSKO15146 869 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 CRCPO75575 148 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 GOT2P00505 430 aaKnown RBP4.96□□□□□ -1.62
SSR1-202ENST00000397511 APOA4P06727 396 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 LTA4HP09960 611 aaKnown RBP4.96□□□□□ -1.62
SSR1-202ENST00000397511 ALDOCP09972 364 aaKnown RBP4.96□□□□□ -1.62
SSR1-202ENST00000397511 MTHFD1P11586 935 aaKnown RBP4.96□□□□□ -1.62
SSR1-202ENST00000397511 BMP4P12644 408 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 BMP1P13497 986 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 NAGAP17050 411 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 HADHAP40939 763 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 HCAR3P49019 387 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 DIO3P55073 304 aa4.96□□□□□ -1.62
SSR1-202ENST00000397511 GALK2Q01415 458 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms