RNA–Protein interactions for RNA: ENST00000397007.8

NUP98-205, Transcript of nucleoporin 98, humanhuman

TSL 1 (best) BASIC

Gene NUP98, Length 3,698 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-205ENST00000397007 CEP97Q8IW35 865 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 SFTPA2Q8IWL1 248 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 HM13Q8TCT9 377 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 PYROXD1Q8WU10 500 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 RAB33BQ9H082 229 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 GAREM1Q9H706 876 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 NSMCE4AQ9NXX6 385 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 PDP2Q9P2J9 529 aa10.4□□□□□ -0.74
NUP98-205ENST00000397007 TARM1B6A8C7 271 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 GDF9O60383 454 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 PSIP1O75475 530 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 TNFP01375 233 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 CCT8P50990 548 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 PDX1P52945 283 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 E2F2Q14209 437 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 LPAL2Q16609 132 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 FASTKD1Q53R41 847 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 MRNIPQ6NTE8 343 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 ENPP7Q6UWV6 458 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 CLDN19Q8N6F1 224 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 ZFPM2Q8WW38 1151 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 C20orf96Q9NUD7 363 aaPredicted RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 SLC30A4O14863 429 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 SHBGP04278 402 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 HNRNPKP61978 463 aaKnown RBP eCLIP10.39□□□□□ -0.75
NUP98-205ENST00000397007 PPARDQ03181 441 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 BOP1Q14137 746 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 CCDC6Q16204 474 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 SPNS2Q8IVW8 549 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 BEND7Q8N7W2 519 aaPredicted RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 OR2I1PQ8NGU4 316 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 SGF29Q96ES7 293 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 NUSAP1Q9BXS6 441 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 IARS2Q9NSE4 1012 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 SAMD15Q9P1V8 674 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 GMEB2Q9UKD1 530 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 GOLGA8KD6RF30 607 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 GOLGA8TH3BQL2 631 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 CSRP1P21291 193 aaKnown RBP10.39□□□□□ -0.75
NUP98-205ENST00000397007 TEX35Q5T0J7 233 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 PDZD3Q86UT5 571 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 MYOCQ99972 504 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 MKS1Q9NXB0 559 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 TAAR2Q9P1P5 351 aa10.39□□□□□ -0.75
NUP98-205ENST00000397007 CCDC151A5D8V7 595 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 LIN7AO14910 233 aaPredicted RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 KLK8O60259 260 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 RFPL1O75677 317 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 SBK3P0C264 359 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 JUNDP17535 347 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 HTR1BP28222 390 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 SLC26A3P40879 764 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 PCDH1Q08174 1060 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 HP1BP3Q5SSJ5 553 aaPredicted RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 GRTP1Q5TC63 336 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 DENND1AQ8TEH3 1009 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 ZCCHC2Q9C0B9 1178 aaKnown RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 FBXO6Q9NRD1 293 aaPredicted RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 APOBEC3BQ9UH17 382 aaKnown RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 GNPTGQ9UJJ9 305 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 NOVA2Q9UNW9 492 aaKnown RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 VPS9D1Q9Y2B5 631 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 CCDC189A1A4V9 331 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 CCDC78A2IDD5 438 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 GP1BAP07359 652 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 SLC35E2BP0CK96 405 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 MPC1LP0DKB6 136 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 CBSLP0DN79 551 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 PKMP14618 531 aaKnown RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 CBSP35520 551 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 ACADVLP49748 655 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 BLKP51451 505 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 TERF1P54274 439 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 CFHR1Q03591 330 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 DLG1Q12959 904 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 TMEM220Q6QAJ8 160 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 DLG3Q92796 817 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 AASDHPPTQ9NRN7 309 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 IGSF5Q9NSI5 407 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 MTRF1LQ9UGC7 380 aaKnown RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 SLC30A1Q9Y6M5 507 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 EME2A4GXA9 379 aaPredicted RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 H3BMM5 538 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 MYO1CO00159 1063 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 FLRT2O43155 660 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 ZRANB3Q5FWF4 1079 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 SLC35F3Q8IY50 421 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 NETO1Q8TDF5 533 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 NAT14Q8WUY8 206 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 SNX19Q92543 992 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 CFAP36Q96G28 342 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 PPCSQ9HAB8 311 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 CYP4F12Q9HCS2 524 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 SARS2Q9NP81 518 aaKnown RBP10.38□□□□□ -0.75
NUP98-205ENST00000397007 SLC24A2Q9UI40 661 aa10.38□□□□□ -0.75
NUP98-205ENST00000397007 ASCC3Q8N3C0 2202 aaKnown RBP10.37□□□□□ -0.75
NUP98-205ENST00000397007 ZNF37AP17032 561 aaPredicted RBP10.37□□□□□ -0.75
NUP98-205ENST00000397007 GP5P40197 560 aa10.37□□□□□ -0.75
NUP98-205ENST00000397007 PRAMEP78395 509 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms