RNA–Protein interactions for RNA: ENST00000396394.6

PSMA1-201, Transcript of proteasome subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSMA1, Length 1,505 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-201ENST00000396394 MMP12P39900 470 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 ARCN1P48444 511 aaKnown RBP12.68□□□□□ -0.38
PSMA1-201ENST00000396394 ILKQ13418 452 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 OLIG2Q13516 323 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 PCLAFQ15004 111 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 ST3GAL2Q16842 350 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 ZSWIM9Q86XI8 627 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 KDF1Q8NAX2 398 aaPredicted RBP12.68□□□□□ -0.38
PSMA1-201ENST00000396394 OR4C6Q8NH72 309 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 BTN2A2Q8WVV5 523 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 RANBP9Q96S59 729 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 AGAP2Q99490 1192 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 TACO1Q9BSH4 297 aaKnown RBP12.68□□□□□ -0.38
PSMA1-201ENST00000396394 C20orf27Q9GZN8 174 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 DNAJC28Q9NX36 388 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 TMEM216Q9P0N5 145 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.68□□□□□ -0.38
PSMA1-201ENST00000396394 ACACBO00763 2458 aa12.68□□□□□ -0.38
PSMA1-201ENST00000396394 TPRP12270 2363 aaKnown RBP12.68□□□□□ -0.38
PSMA1-201ENST00000396394 TMEM114B3SHH9 223 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SCAMP1O15126 338 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 CBX6O95503 412 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 C2P06681 752 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ALPPL2P10696 532 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 C6P13671 934 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 CES1P23141 567 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 NMBRP28336 390 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 IGFALSP35858 605 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SLC1A6P48664 564 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 CCNG1P51959 295 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 THOP1P52888 689 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SMAD1Q15797 465 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 C16orf46Q6P387 395 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 KIAA0408Q6ZU52 694 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 GALNT7Q86SF2 657 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ZC3HC1Q86WB0 502 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PGBD5Q8N414 524 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PPP1R14CQ8TAE6 165 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SREK1Q8WXA9 508 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TADA1Q96BN2 335 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 IMP4Q96G21 291 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 DUSP23Q9BVJ7 150 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SCUBE2Q9NQ36 999 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 MBNL1Q9NR56 388 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TREX1Q9NSU2 369 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ARL8BQ9NVJ2 186 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SLC17A6Q9P2U8 582 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TCAF1Q9Y4C2 921 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 CSNK1G3Q9Y6M4 447 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 A0A096LPK6 155 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 HGSO14964 777 aaPredicted RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 GSC2O15499 205 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SIGLEC6O43699 453 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 LZTS3O60299 673 aaPredicted RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 RFPL3O75679 317 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SNUPNO95149 360 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 RALBP11234 206 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TPH1P17752 444 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PAMP19021 973 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ACP1P24666 158 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ACADVLP49748 655 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 HK2P52789 917 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 AQP5P55064 265 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ABCE1P61221 599 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 WSCD2Q2TBF2 565 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PROX2Q3B8N5 592 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ZNF542PQ5EBM4 170 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 KIAA0930Q6ICG6 404 aaPredicted RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 KDELC1Q6UW63 502 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 DPPA4Q7L190 304 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TMPRSS12Q86WS5 348 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 C10orf107Q8IVU9 208 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PAF1Q8N7H5 531 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PPHLN1Q8NEY8 458 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 SPATA22Q8NHS9 363 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 GABPB2Q8TAK5 448 aaPredicted RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PPP4R1Q8TF05 950 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 VPS39Q96JC1 886 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 MRGPRX2Q96LB1 330 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TBATAQ96M53 351 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 NSMCE3Q96MG7 304 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 ANKRD27Q96NW4 1050 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 IARS2Q9NSE4 1012 aaKnown RBP12.67□□□□□ -0.38
PSMA1-201ENST00000396394 UCKL1Q9NWZ5 548 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 COQ6Q9Y2Z9 468 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 PCDHGC4Q9Y5F7 938 aa12.67□□□□□ -0.38
PSMA1-201ENST00000396394 TP53BP1Q12888 1972 aaPredicted RBP12.66□□□□□ -0.38
PSMA1-201ENST00000396394 WDFY3Q8IZQ1 3526 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 G3V2L1 256 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 TRIM38O00635 465 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 KLHL2O95198 593 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 HLA-DQB2P05538 268 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 GIMD1P0DJR0 217 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 ESRRAP11474 423 aaPredicted RBP12.66□□□□□ -0.38
PSMA1-201ENST00000396394 EZRP15311 586 aaKnown RBP12.66□□□□□ -0.38
PSMA1-201ENST00000396394 JUNDP17535 347 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 CRABP2P29373 138 aa12.66□□□□□ -0.38
PSMA1-201ENST00000396394 EIF2B5Q13144 721 aaKnown RBP12.66□□□□□ -0.38
PSMA1-201ENST00000396394 IRF4Q15306 451 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms