RNA–Protein interactions for RNA: ENST00000394269.7

TCOF1-203, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 3,400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-203ENST00000394269 KLQ9UEF7 1012 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 CROTQ9UKG9 612 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 PCDHB1Q9Y5F3 818 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 WASH3PC4AMC7 463 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 ATP6V1C1P21283 382 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 HMGCS1Q01581 520 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 SATB1Q01826 763 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 GTF2H2Q13888 395 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 ZNF423Q2M1K9 1284 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 TIGD2Q4W5G0 525 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 GTF2H2CQ6P1K8 395 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 ADAMTSL2Q86TH1 951 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 ATG10Q9H0Y0 220 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 ZNF385DQ9H6B1 395 aa10.97□□□□□ -0.65
TCOF1-203ENST00000394269 DUS2Q9NX74 493 aaKnown RBP10.97□□□□□ -0.65
TCOF1-203ENST00000394269 H7C0S8 307 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 E2F3O00716 465 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 SOCS5O75159 536 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 MLYCDO95822 493 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 YBX1P67809 324 aaKnown RBP10.96□□□□□ -0.65
TCOF1-203ENST00000394269 PIGGQ5H8A4 983 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 ARMC3Q5W041 872 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 GOLGA7Q7Z5G4 137 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 ADIPOR2Q86V24 386 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 RETREG3Q86VR2 466 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 ASB2Q96Q27 587 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 FARSBQ9NSD9 589 aaKnown RBP10.96□□□□□ -0.65
TCOF1-203ENST00000394269 AURKCQ9UQB9 309 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 NDUFAF1Q9Y375 327 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 PCDHGA7Q9Y5G6 932 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 DNAH14Q0VDD8 3507 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 COL4A6Q14031 1691 aa10.96□□□□□ -0.65
TCOF1-203ENST00000394269 A0A1W2PQ67 120 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 PRORSD1PA6NEY8 169 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SLC2A4P14672 509 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 METAP1P53582 386 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 GALNT1Q10472 559 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-203ENST00000394269 CAMK1Q14012 370 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 CRY1Q16526 586 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ATP6AP1LQ52LC2 224 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 KANK2Q63ZY3 851 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SBSNQ6UWP8 590 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 FAM217AQ8IXS0 508 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 OR2T11Q8NH01 316 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 CLHC1Q8NHS4 586 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 FOXJ1Q92949 421 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ARMC5Q96C12 935 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SPATS2LQ9NUQ6 558 aaKnown RBP10.96□□□□□ -0.66
TCOF1-203ENST00000394269 OPTCQ9UBM4 332 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SLC8A2Q9UPR5 921 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 HS3ST2Q9Y278 367 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 COQ6Q9Y2Z9 468 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 RPS17P08708 135 aaKnown RBP10.96□□□□□ -0.66
TCOF1-203ENST00000394269 UROSP10746 265 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 VCLP18206 1134 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 CAPN3P20807 821 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 RPIAP49247 311 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ABRQ12979 859 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 GRIN2CQ14957 1233 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ACOX1Q15067 660 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 NAIF1Q69YI7 327 aaPredicted RBP10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ELMSAN1Q6PJG2 1045 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 CHSY3Q70JA7 882 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 HSD11B1LQ7Z5J1 315 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 HEPHQ9BQS7 1158 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SPAG4Q9NPE6 437 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SLAMF8Q9P0V8 285 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 DLGAP2Q9P1A6 1054 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 EPS15L1Q9UBC2 864 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 SUN2Q9UH99 717 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 PRPF19Q9UMS4 504 aaKnown RBP10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ERVW-1Q9UQF0 538 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 REV3LO60673 3130 aa10.96□□□□□ -0.66
TCOF1-203ENST00000394269 ANKRD36A6QL64 1941 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 ANAPC1Q9H1A4 1944 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 SNUPNO95149 360 aaKnown RBP10.95□□□□□ -0.66
TCOF1-203ENST00000394269 STAMBPO95630 424 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 FGF4P08620 206 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 GPX3P22352 226 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 ITPKAP23677 461 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 CCR7P32248 378 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 NSG1P42857 185 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 DGKGP49619 791 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 INHBCP55103 352 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 KCNK10P57789 538 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 ST8SIA6P61647 398 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 POLR2LP62875 67 aaKnown RBP10.95□□□□□ -0.66
TCOF1-203ENST00000394269 CDC16Q13042 620 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 ABRAXAS2Q15018 415 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 GPRC6AQ5T6X5 926 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 TMEM154Q6P9G4 183 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 TXNDC11Q6PKC3 985 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 ADGRD2Q7Z7M1 963 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 TRIM74Q86UV6 250 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 PCYOX1LQ8NBM8 494 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 RIOK2Q9BVS4 552 aaKnown RBP10.95□□□□□ -0.66
TCOF1-203ENST00000394269 FAM83DQ9H4H8 585 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 PCDH12Q9NPG4 1184 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 ELOVL2Q9NXB9 296 aa10.95□□□□□ -0.66
TCOF1-203ENST00000394269 IGFBP4P22692 258 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms