RNA–Protein interactions for RNA: ENST00000394082.8

SNRPA1-202, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-202ENST00000394082 LATS2Q9NRM7 1088 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 FGF21Q9NSA1 209 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 SPTLC3Q9NUV7 552 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 KLHL8Q9P2G9 620 aaPredicted RBP17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 TRIM10Q9UDY6 481 aa17.1■□□□□ 0.33
SNRPA1-202ENST00000394082 PIPSLA2A3N6 862 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 MGAT4DA6NG13 374 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A9O60656 530 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 TIAF1O95411 115 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 PECAM1P16284 738 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A6P19224 532 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A1P22309 533 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A4P22310 534 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 CHRNA4P43681 627 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 TUBB4BP68371 445 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 XRCC4Q13426 336 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 TUBB2AQ13885 445 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT8Q16880 541 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 FAM151BQ6UXP7 276 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 FAM83HQ6ZRV2 1179 aaPredicted RBP17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 ASB18Q6ZVZ8 466 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 B4GALNT4Q76KP1 1039 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 SYVN1Q86TM6 617 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 VSTM4Q8IW00 320 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 KATNAL2Q8IYT4 538 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 FAM26EQ8N5C1 309 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 OR2L2Q8NH16 312 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 BLOC1S5Q8TDH9 187 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 LRFN5Q96NI6 719 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 TUBB2BQ9BVA1 445 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 ACTL8Q9H568 366 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A7Q9HAW7 530 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A10Q9HAW8 530 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 UGT1A8Q9HAW9 530 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 TLK1Q9UKI8 766 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 MAN2B2Q9Y2E5 1009 aa17.09■□□□□ 0.33
SNRPA1-202ENST00000394082 CDC14CA4D256 554 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 AGAP14A8MT82 685 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 ZRANB2O95218 330 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 ZBTB11O95625 1053 aaPredicted RBP17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 MSL3P1P0C860 447 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 GP1BBP13224 206 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 PTPN4P29074 926 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 PPP1CAP62136 330 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 PDE1BQ01064 536 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 LAMB3Q13751 1172 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 NFE2L1Q14494 772 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 PLCL1Q15111 1095 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 NOMO1Q15155 1222 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 BCL7AQ4VC05 210 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 DNTTIP2Q5QJE6 756 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 ATCAYQ86WG3 371 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 OOSP2Q86WS3 158 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 RCOR2Q8IZ40 523 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 SLC25A41Q8N5S1 370 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 ZNF398Q8TD17 642 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 QKIQ96PU8 341 aaKnown RBP eCLIP17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 MAP3K3Q99759 626 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 KIR3DX1Q9H7L2 352 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 MLXIPLQ9NP71 852 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 HRASLS2Q9NWW9 162 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 PCDHGA9Q9Y5G4 932 aaKnown RBP17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 ALG6Q9Y672 507 aa17.08■□□□□ 0.32
SNRPA1-202ENST00000394082 hCG_1818297A0A087WSY0 165 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 UBA6A0AVT1 1052 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 C5orf60A6NFR6 353 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 OR2AG2A6NM03 316 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 K7EM74 188 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 STX7O15400 261 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 CPNE3O75131 537 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 MSH3P20585 1137 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 PTMSP20962 102 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 LPOP22079 712 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 ARL4DP49703 201 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 RPS15P62841 145 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 ADCY2Q08462 1091 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 IZUMO3Q5VZ72 239 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 ZC3H18Q86VM9 953 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 CNGA4Q8IV77 575 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 IPMKQ8NFU5 416 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 INSM2Q96T92 566 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 FSD1LQ9BXM9 530 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 SYTL2Q9HCH5 934 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 IMP3Q9NV31 184 aaKnown RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 SLC24A2Q9UI40 661 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 PSMD13Q9UNM6 376 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 PLAAQ9Y263 795 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 BTRCQ9Y297 605 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 COLEC10Q9Y6Z7 277 aa17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 USP9YO00507 2555 aaPredicted RBP17.07■□□□□ 0.32
SNRPA1-202ENST00000394082 C2orf81A6NN90 581 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 MATN2O00339 956 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 GPR39O43194 453 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 ANXA9O76027 345 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 PRAMEF1O95521 474 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 EBLN1P0CF75 366 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 NDUFS1P28331 727 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 CA5AP35218 305 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 GEMP55040 296 aa17.06■□□□□ 0.32
SNRPA1-202ENST00000394082 KCNAB1Q14722 419 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms