RNA–Protein interactions for RNA: ENST00000391813.5

SHANK1-203, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 1 (best) BASIC

Gene SHANK1, Length 4,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-203ENST00000391813 REM1O75628 298 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 CCNCP24863 283 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ASMTP46597 345 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 GNG2P59768 71 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 EEF1DP3Q658K8 133 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 LRRC58Q96CX6 371 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ERLEC1Q96DZ1 483 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 RDH12Q96NR8 316 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ERMAPQ96PL5 475 aaPredicted RBP19.47■□□□□ 0.71
SHANK1-203ENST00000391813 CAPN10Q9HC96 672 aa19.47■□□□□ 0.71
SHANK1-203ENST00000391813 ISPDA4D126 451 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 SMPD1P17405 629 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 AP3S2P59780 193 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 KCNJ11Q14654 390 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 TSC22D1Q15714 1073 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 FAM35AQ86V20 835 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 FAM20CQ8IXL6 584 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 NKIRAS2Q9NYR9 191 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 NUDT4Q9NZJ9 180 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 PCDHB1Q9Y5F3 818 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 LRATO95237 230 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 ARF4P18085 180 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-203ENST00000391813 ARL4DP49703 201 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 DSG4Q86SJ6 1040 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 KBTBD7Q8WVZ9 684 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 SLC13A3Q8WWT9 602 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 CCDC177Q9NQR7 707 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-203ENST00000391813 ASAH2Q9NR71 780 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 ZNF490Q9ULM2 529 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-203ENST00000391813 LRP6O75581 1613 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 PRPS2P11908 318 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 KIAA0930Q6ICG6 404 aaPredicted RBP19.46■□□□□ 0.71
SHANK1-203ENST00000391813 ZUFSPQ96AP4 578 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 CRELD1Q96HD1 420 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 B3GNT5Q9BYG0 378 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 RAB23Q9ULC3 237 aa19.46■□□□□ 0.71
SHANK1-203ENST00000391813 AFDNP55196 1824 aaKnown RBP19.46■□□□□ 0.71
SHANK1-203ENST00000391813 RSL1D1O76021 490 aaKnown RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 YAP1P46937 504 aaKnown RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 MBLAC2Q68D91 279 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 USP45Q70EL2 814 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 AURKBQ96GD4 344 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 GFM1Q96RP9 751 aaKnown RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 CCDC106Q9BWC9 280 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 SLC39A8Q9C0K1 460 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 IGFLR1Q9H665 355 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 KCNE2Q9Y6J6 123 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 FAM172BPA6NC97 362 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 M0R2N6 131 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ACOX3O15254 700 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ATP5C1P36542 298 aaKnown RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 SULT1C3Q6IMI6 304 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 KLHL35Q6PF15 583 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 XKRXQ6PP77 449 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF384Q8TF68 577 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 NFKBIL1Q9UBC1 381 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 PCDHGA3Q9Y5H0 932 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 MAFBQ9Y5Q3 323 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 PRAMEF33A0A0G2JMD5 474 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 CXorf49A8MYA2 514 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 SLC7A4O43246 635 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 PRAMEF10O60809 474 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 CYP2A6P11509 494 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ANXA8P13928 327 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF182P17025 639 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 MAXP61244 160 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 CTU1Q7Z7A3 348 aaKnown RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 NTPCRQ9BSD7 190 aaKnown RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 A0A0J9YVX5 310 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 C9JVG2 144 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 STX16-NPEPL1H3BU86 382 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ERVK-8P63133 956 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 RFTN1Q14699 578 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 RHBDF2Q6PJF5 856 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 TOP6BLQ8N6T0 577 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 FAIM2Q9BWQ8 316 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 RACGAP1Q9H0H5 632 aa19.45■□□□□ 0.7
SHANK1-203ENST00000391813 ZNF395Q9H8N7 513 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 PAK6Q9NQU5 681 aaPredicted RBP19.45■□□□□ 0.7
SHANK1-203ENST00000391813 NOBOXO60393 691 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 TEAD4Q15561 434 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 PLEKHG4Q58EX7 1191 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 XKR6Q5GH73 641 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 ARMC6Q6NXE6 501 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 FAM220AQ7Z4H9 259 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 OR8H3Q8N146 312 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 MRPL45Q9BRJ2 306 aaKnown RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 DTLQ9NZJ0 730 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 HES2Q9Y543 173 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 TCRBV7S3A2A0A539 114 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 OR6C70A6NIJ9 312 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 BOLA2-SMG1P6H3BVE0 249 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 AP3D1O14617 1153 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 GLDCP23378 1020 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 NMBRP28336 390 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 GUCA1AP43080 201 aaPredicted RBP19.44■□□□□ 0.7
SHANK1-203ENST00000391813 TLR1Q15399 786 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 SMU1Q2TAY7 513 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 DENND1AQ8TEH3 1009 aa19.44■□□□□ 0.7
SHANK1-203ENST00000391813 TFAP2BQ92481 460 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms