RNA–Protein interactions for RNA: ENST00000390509.1

TRAJ28-201, Transcript of T cell receptor alpha joining 28, humanhuman

APPRIS P1 BASIC

Gene TRAJ28, Length 66 nt, Biotype TR J gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAJ28-201ENST00000390509 HEATR3Q7Z4Q2 680 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ANKS1BQ7Z6G8 1248 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PTAR1Q7Z6K3 402 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZER1Q7Z7L7 766 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TTC7BQ86TV6 843 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 WDR5BQ86VZ2 330 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RASSF3Q86WH2 238 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 C2CD5Q86YS7 1000 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TGIF2LYQ8IUE0 185 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 WDR75Q8IWA0 830 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DHX40Q8IX18 779 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF654Q8IZM8 581 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ADSSL1Q8N142 457 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF664Q8N3J9 261 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MARVELD2Q8N4S9 558 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM217Q8N7C4 229 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 EXD3Q8N9H8 876 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SPANXA2-OT1Q8N9U9 137 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RNF149Q8NC42 400 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 KCTD6Q8NC69 237 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ABCF1Q8NE71 845 aaKnown RBP eCLIP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZMIZ2Q8NF64 920 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RDM1Q8NG50 284 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OR2L3Q8NG85 312 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OR4Q3Q8NH05 313 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OR6S1Q8NH40 331 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NEIL3Q8TAT5 605 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 C11orf45Q8TAV5 145 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ARRDC2Q8TBH0 407 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MAPK15Q8TD08 544 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 LMX1AQ8TE12 382 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OTUD7AQ8TE49 926 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NSUN6Q8TEA1 469 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SMCR8Q8TEV9 937 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 HDAC7Q8WUI4 952 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC38A5Q8WUX1 472 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FAR1Q8WVX9 515 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ITLN1Q8WWA0 313 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NRG4Q8WWG1 115 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ROBO4Q8WZ75 1007 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ARHGAP45Q92619 1136 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RND1Q92730 232 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 HTRA1Q92743 480 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 KRT35Q92764 455 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FRZBQ92765 325 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC5A5Q92911 643 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PIGTQ969N2 578 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 JAKMIP2Q96AA8 810 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PHF21AQ96BD5 680 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CCDC97Q96F63 343 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 C16orf74Q96GX8 76 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 APIPQ96GX9 242 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RIPOR3Q96MK2 946 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TSNARE1Q96NA8 513 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NECTIN4Q96NY8 510 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NT5C1BQ96P26 610 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 QRFPRQ96P65 431 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DGAT2Q96PD7 388 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PRAM1Q96QH2 718 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FRG2BQ96QU4 278 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 HIST1H2AAQ96QV6 131 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF382Q96SR6 550 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FEZ1Q99689 392 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 VRK1Q99986 396 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DDX50Q9BQ39 737 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 KXD1Q9BQD3 176 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TM2D3Q9BRN9 247 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 IFT27Q9BW83 186 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 STRA6Q9BX79 667 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MRPL4Q9BYD3 311 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FRMD8Q9BZ67 464 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OCR1Q9BZK8 76 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MS4A7Q9GZW8 240 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TKTL2Q9H0I9 626 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 C10orf95Q9H7T3 257 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CAAP1Q9H8G2 361 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 VPS37BQ9H9H4 285 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 XPO5Q9HAV4 1204 aaKnown RBP eCLIP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 APOBEC3GQ9HC16 384 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PCDH12Q9NPG4 1184 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 B3GAT2Q9NPZ5 323 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 HPS4Q9NQG7 708 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 NECTIN3Q9NQS3 549 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 PARP11Q9NR21 331 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 RXFP3Q9NSD7 469 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM106BQ9NUM4 274 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 INTS9Q9NV88 658 aaKnown RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 SLC38A7Q9NVC3 462 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 BABAM1Q9NWV8 329 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 TMEM9Q9P0T7 183 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MARCH4Q9P2E8 410 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 DNAJB4Q9UDY4 337 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ZNF629Q9UEG4 869 aaPredicted RBP-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 CDH22Q9UJ99 828 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 FBXL5Q9UKA1 691 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 INTUQ9ULD6 942 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 MAPRE3Q9UPY8 281 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 OSGIN2Q9Y236 505 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 ATP8A1Q9Y2Q0 1164 aa-0.37□□□□□ -2.47
TRAJ28-201ENST00000390509 YIPF1Q9Y548 306 aa-0.37□□□□□ -2.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms