RNA–Protein interactions for RNA: ENST00000389301.7

FANCA-202, Transcript of FA complementation group A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FANCA, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-202ENST00000389301 RAVER1Q8IY67 606 aaKnown RBP12.37□□□□□ -0.43
FANCA-202ENST00000389301 ZNF248Q8NDW4 579 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 DCAKDQ8WVC6 231 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 SLC13A3Q8WWT9 602 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 BSNDQ8WZ55 320 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 ZFP3Q96NJ6 502 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 PKP2Q99959 881 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 ADARB2Q9NS39 739 aaKnown RBP12.37□□□□□ -0.43
FANCA-202ENST00000389301 GLYATL1P3A0A0U1RQE8 302 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 URADA6NGE7 173 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 SPATA31C2B4DYI2 1134 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 ACOX3O15254 700 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 LYPLA2O95372 231 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 DNTTP04053 509 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 SMIM10L2AP0DMW4 78 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 SMIM10L2BP0DMW5 78 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 MYCLP1P12525 358 aaPredicted RBP12.37□□□□□ -0.43
FANCA-202ENST00000389301 SYT16Q17RD7 645 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 ALG11Q2TAA5 492 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 CPNE8Q86YQ8 564 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 STYXQ8WUJ0 223 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 AHCYL2Q96HN2 611 aaKnown RBP12.37□□□□□ -0.43
FANCA-202ENST00000389301 HIPK3Q9H422 1215 aa12.37□□□□□ -0.43
FANCA-202ENST00000389301 ATRNO75882 1429 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 PRAMEF1O95521 474 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 YES1P07947 543 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 CDH1P12830 882 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 HDCP19113 662 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 DEFA5Q01523 94 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 PLEKHG6Q3KR16 790 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 FAM174BQ3ZCQ3 159 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SFT2D3Q587I9 215 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 NIPAL1Q6NVV3 410 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ZNF557Q8N988 423 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 PAK6Q9NQU5 681 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 RBM7Q9Y580 266 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 B4GALT4O60513 344 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 REM1O75628 298 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 CYP11A1P05108 521 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 CCNCP24863 283 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 VBP1P61758 197 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 CSTF1Q05048 431 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 BTG3Q14201 252 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 SMU1Q2TAY7 513 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 FRRS1Q6ZNA5 592 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 RTL4Q6ZR62 310 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 LINGO2Q7L985 606 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 RFKQ969G6 155 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SLC38A4Q969I6 547 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ITFG2Q969R8 447 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 RERGQ96A58 199 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 CXorf40BQ96DE9 158 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 GLIS2Q9BZE0 524 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 DCSTAMPQ9H295 470 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SLC17A6Q9P2U8 582 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ZNF214Q9UL59 606 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 CLTCQ00610 1675 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 A0A1W2PQH9 124 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 MAGEB3O15480 346 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 NME6O75414 186 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 GADD45GO95257 159 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 AKR1A1P14550 325 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ACADLP28330 430 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 IFI44LQ53G44 452 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 DCAF12L1Q5VU92 463 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ARRDC4Q8NCT1 418 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 C12orf43Q96C57 262 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 EHD1Q9H4M9 534 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 AMBNQ9NP70 447 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 AASSQ9UDR5 926 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 RIIAD1A6NNX1 92 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ARPC2O15144 300 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 GOT2P00505 430 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 SLURP2P0DP57 97 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SLC2A2P11168 524 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 OGNP20774 298 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 EFNA1P20827 205 aaPredicted RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 S100GP29377 79 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 PDHA2P29803 388 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ADNP2Q6IQ32 1131 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SLITRK4Q8IW52 837 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 MPP5Q8N3R9 675 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 PACRGLQ8N7B6 248 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SMG8Q8ND04 991 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 RNF31Q96EP0 1072 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 POLR2J2Q9GZM3 115 aaKnown RBP12.36□□□□□ -0.43
FANCA-202ENST00000389301 RNF38Q9H0F5 515 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ATG10Q9H0Y0 220 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 SIX2Q9NPC8 291 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 ZNF358Q9NW07 568 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 TVP23BQ9NYZ1 205 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 NUP50Q9UKX7 468 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 NCKAP1Q9Y2A7 1128 aa12.36□□□□□ -0.43
FANCA-202ENST00000389301 TRIM64CA6NLI5 447 aa12.35□□□□□ -0.43
FANCA-202ENST00000389301 TPST2O60704 377 aa12.35□□□□□ -0.43
FANCA-202ENST00000389301 PPP1R11O60927 126 aaPredicted RBP12.35□□□□□ -0.43
FANCA-202ENST00000389301 SLC35G4P0C7Q5 338 aa12.35□□□□□ -0.43
FANCA-202ENST00000389301 ZNF806P0C7X5 589 aa12.35□□□□□ -0.43
FANCA-202ENST00000389301 CACNG1Q06432 222 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms